Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 VN1R104P-201ENST00000505115 1009 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 HMGB1P22-201ENST00000505315 124 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 AC022493.2-201ENST00000506122 481 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 AC108078.2-201ENST00000510750 236 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 RNU6-475P-201ENST00000516073 104 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 RNU2-53P-201ENST00000516257 147 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 RNA5SP468-201ENST00000516782 93 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 RNU6-64P-201ENST00000517119 105 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 IGKV2-38-201ENST00000517443 247 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.12□□□□□ -1.75
CD248Q9HCU0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.12□□□□□ -1.75
CD248Q9HCU0 AL133271.1-201ENST00000538229 291 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 MIR5685-201ENST00000579080 79 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.12□□□□□ -1.75
CD248Q9HCU0 AC012443.1-201ENST00000605605 231 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 U2.17-201ENST00000611454 95 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 MIR6075-201ENST00000620782 95 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 MIR8062-201ENST00000621515 85 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CD248Q9HCU0 AC244205.2-202ENST00000635781 342 ntBASIC4.12□□□□□ -1.75
CD248Q9HCU0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.12□□□□□ -1.75
CD248Q9HCU0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CD248Q9HCU0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD248Q9HCU0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD248Q9HCU0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD248Q9HCU0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 RNU6-50P-201ENST00000362356 103 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 RNU6-960P-201ENST00000364056 120 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 Y_RNA.424-201ENST00000384063 103 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 RNU2-15P-201ENST00000410692 191 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 RNA5SP107-201ENST00000411358 122 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 AL358472.1-201ENST00000431295 329 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 OSTCP8-201ENST00000445117 448 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 AL353691.1-201ENST00000451332 387 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 RPL36AP13-201ENST00000457490 317 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 SNORD97-201ENST00000459187 142 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 RNU6-1092P-201ENST00000516955 87 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 RANP3-201ENST00000530970 276 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 MIR5692C1-201ENST00000585309 91 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 AC004805.2-201ENST00000605382 482 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 MIR6868-201ENST00000611215 58 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 AL021879.1-201ENST00000611756 288 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 AL121772.2-201ENST00000614331 297 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 AL354798.1-201ENST00000622505 329 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.11□□□□□ -1.75
CD248Q9HCU0 AC103710.2-202ENST00000641454 2853 ntBASIC4.11□□□□□ -1.75
CD248Q9HCU0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD248Q9HCU0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD248Q9HCU0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD248Q9HCU0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD248Q9HCU0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 RNU1-35P-201ENST00000362782 153 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 SNORA62.3-201ENST00000365110 153 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 Y_RNA.485-201ENST00000384395 102 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 RNU6-713P-201ENST00000384761 107 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 RNA5SP129-201ENST00000410276 118 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 RNU4-65P-201ENST00000410473 140 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 RNU2-23P-201ENST00000410545 195 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 AL590632.1-201ENST00000424289 371 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 USMG5P1-201ENST00000425964 177 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 AL691449.1-201ENST00000426570 421 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 HMGN2P20-201ENST00000437531 273 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 HIGD1AP11-201ENST00000438361 280 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 DYNLT3P2-201ENST00000442517 295 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 RPS11P1-201ENST00000451072 473 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 RNU6-120P-201ENST00000516077 103 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 248.1 ms