Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RN7SL346P-201ENST00000491561 294 ntBASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 AC068339.1-201ENST00000526965 141 ntBASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 CYCSP39-201ENST00000565821 309 ntBASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 AC011471.1-201ENST00000585766 187 ntBASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 AP001541.1-201ENST00000623322 1904 ntBASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.44□□□□□ -1.06
SCAF1Q9H7N4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 SNORD87-201ENST00000364849 89 ntBASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 RPL21P3-201ENST00000395517 478 ntBASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 GNG5P5-201ENST00000420444 220 ntBASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 AC005300.1-201ENST00000428401 373 ntBASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 AL138880.2-201ENST00000616214 239 ntBASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 5S_rRNA.11-201ENST00000618635 84 ntBASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 AL672296.1-201ENST00000427780 2158 ntBASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAF1Q9H7N4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 RNA5SP478-201ENST00000364657 115 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 MIR891A-201ENST00000401237 79 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 RANP2-201ENST00000456833 229 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 AC083982.1-201ENST00000485679 344 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 RPL30P5-201ENST00000494923 336 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 RNU6-615P-201ENST00000516065 106 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 RNU6-1256P-201ENST00000516539 103 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 MIR1254-2-201ENST00000579553 63 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 BMS1P21-201ENST00000634565 365 ntBASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAF1Q9H7N4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 Z73965.1-201ENST00000623412 2297 ntBASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 MIR320B2-201ENST00000408479 138 ntBASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 AL096829.1-201ENST00000413677 457 ntBASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 RPL35AP3-201ENST00000414680 288 ntBASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 SNORA31.8-201ENST00000516327 108 ntBASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 AC027229.1-201ENST00000583887 253 ntBASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 AL356575.1-201ENST00000603008 283 ntBASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCAF1Q9H7N4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 AC092681.1-201ENST00000297369 291 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 Y_RNA.362-201ENST00000365518 110 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 AC008065.1-201ENST00000428525 348 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 RPL23AP14-201ENST00000468281 468 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 AC078817.1-201ENST00000492623 435 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 AC096996.1-201ENST00000563813 325 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 RN7SL52P-201ENST00000584271 284 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 RN7SL722P-201ENST00000617780 284 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 RN7SL565P-201ENST00000618246 284 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 AC091953.3-201ENST00000623220 236 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 U6.115-201ENST00000636045 103 ntBASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.06
SCAF1Q9H7N4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SCAF1Q9H7N4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
SCAF1Q9H7N4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SCAF1Q9H7N4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.4□□□□□ -1.07
SCAF1Q9H7N4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC8.4□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms