Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH4Q99466 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH4Q99466 AC018529.3-201ENST00000624212 2254 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 AC010733.2-201ENST00000589496 5702 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH4Q99466 Y_RNA.2-201ENST00000362330 96 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 RNU5A-8P-201ENST00000364102 114 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 RNU6-301P-201ENST00000384277 107 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 ARF4P3-201ENST00000397387 509 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH4Q99466 AL109933.2-201ENST00000452651 260 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.14□□□□□ -1.91
NOTCH4Q99466 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 RNU2-53P-201ENST00000516257 147 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 RNA5SP367-201ENST00000516557 118 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 RNU7-51P-201ENST00000516560 62 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 Y_RNA.720-201ENST00000517166 92 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 AC011979.2-201ENST00000527568 352 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH4Q99466 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH4Q99466 TGIF1P1-201ENST00000558095 802 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 CYCSP39-201ENST00000565821 309 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 MIR5690-201ENST00000583739 73 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH4Q99466 AC024153.1-201ENST00000603103 365 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 AC113194.1-201ENST00000606037 500 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 OR6R2P-201ENST00000609216 300 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 AC012409.4-201ENST00000612923 249 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 uc_338.12-201ENST00000616344 181 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH4Q99466 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH4Q99466 AC116096.1-201ENST00000566804 2314 ntBASIC3.14□□□□□ -1.91
NOTCH4Q99466 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH4Q99466 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH4Q99466 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH4Q99466 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH4Q99466 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC096644.4-201ENST00000563417 2912 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC015813.6-201ENST00000624409 5808 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH4Q99466 RNU4-44P-201ENST00000363050 141 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 RNU6-379P-201ENST00000363813 104 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 RNU6-1207P-201ENST00000384343 107 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 MIR548I3-201ENST00000408378 149 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 MIR548I1-201ENST00000408810 149 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 OR4K11P-201ENST00000431829 904 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 AL031663.1-201ENST00000437445 219 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC108938.1-201ENST00000451204 136 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 RPS24P6-201ENST00000452670 400 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 RN7SL429P-201ENST00000479090 223 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 RN7SL489P-201ENST00000486185 223 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 RN7SL327P-201ENST00000488659 223 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 OR4K8P-201ENST00000578842 1048 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC060771.1-201ENST00000582031 164 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC100812.1-201ENST00000607622 580 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC245517.5-201ENST00000611529 162 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 RN7SL853P-201ENST00000617250 223 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
NOTCH4Q99466 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH4Q99466 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 Y_RNA.167-201ENST00000363735 109 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 Y_RNA.493-201ENST00000384422 102 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 Y_RNA.645-201ENST00000391229 102 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 Y_RNA.615-201ENST00000410769 117 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 RN7SKP284-201ENST00000411002 343 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC008267.5-201ENST00000424928 265 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 SKA2P1-201ENST00000425592 390 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 HMGB3P11-201ENST00000440127 604 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 RPL32P28-201ENST00000443577 397 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 HIGD1AP3-201ENST00000515857 278 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 OR11H5P-201ENST00000554039 926 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 H3F3AP1-201ENST00000559984 334 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AL022099.1-201ENST00000604551 712 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AL008729.2-201ENST00000606393 473 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 uc_338.1-201ENST00000612113 180 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AP001486.3-201ENST00000615334 372 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 LINC00901.1-201ENST00000617252 152 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC005592.1-201ENST00000566527 1640 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC000403.1-201ENST00000613696 3585 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH4Q99466 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH4Q99466 Y_RNA.22-201ENST00000362492 102 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms