Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.39□□□□□ -1.87
SIN3AQ96ST3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.39□□□□□ -1.87
SIN3AQ96ST3 Y_RNA.1-201ENST00000352915 104 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 Y_RNA.6-201ENST00000362350 114 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 DEFA7P-201ENST00000382676 285 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 RNU6-456P-201ENST00000384493 107 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 CALM2P3-201ENST00000400429 449 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AL591416.1-201ENST00000404015 867 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 RPL7P10-201ENST00000417407 739 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AL451054.2-201ENST00000420896 202 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 MED13P1-201ENST00000428342 171 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AC023194.1-201ENST00000493084 308 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SIN3AQ96ST3 MTND4LP22-201ENST00000508209 276 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AL359273.1-201ENST00000510918 627 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AC010493.1-201ENST00000513479 292 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 RNA5SP281-201ENST00000516504 135 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AP006587.4-201ENST00000526053 529 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 OR5BN1P-201ENST00000532955 829 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AL121992.2-201ENST00000606262 256 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AC007684.1-201ENST00000609671 477 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AL137847.3-201ENST00000611521 109 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AC009161.2-201ENST00000624626 138 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AL157786.1-207ENST00000627771 695 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AC068137.3-201ENST00000639191 341 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SIN3AQ96ST3 AC073869.6-201ENST00000640656 341 ntBASIC3.39□□□□□ -1.87
SIN3AQ96ST3 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC027514.1-201ENST00000588561 1603 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 RNU6-50P-201ENST00000362356 103 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 RNU6-960P-201ENST00000364056 120 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 SMIM11P1-201ENST00000369586 178 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 RNU6-701P-201ENST00000384059 107 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 MIR1-2-201ENST00000384961 85 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 RNA5SP181-201ENST00000410246 98 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 UBE2V1P10-201ENST00000414685 269 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 RPL27AP8-201ENST00000424277 446 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 RPS3AP44-201ENST00000425466 790 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC002486.1-201ENST00000435098 391 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 RPS20P20-201ENST00000460498 340 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 RNU6-410P-201ENST00000517006 107 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 MTND1P5-201ENST00000517906 940 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC078814.3-201ENST00000553036 491 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 MIR3670-2-201ENST00000582974 65 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 MIR3670-1-201ENST00000584160 65 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 MIR3670-3-201ENST00000584855 65 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC098848.2-201ENST00000588023 330 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 DPPA3P3-201ENST00000603842 430 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AP002826.1-201ENST00000608835 315 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 MIR3670-4-201ENST00000612260 65 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC026585.1-201ENST00000619582 524 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AC073534.2-201ENST00000620377 381 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 AL359880.1-201ENST00000621879 266 ntBASIC3.38□□□□□ -1.87
SIN3AQ96ST3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SIN3AQ96ST3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 Y_RNA.367-201ENST00000365544 101 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 MTCO3P40-201ENST00000392516 676 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 MTATP6P18-201ENST00000417994 673 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 ZNF90P2-204ENST00000419323 1075 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AL353193.1-201ENST00000421444 268 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 RAC1P6-201ENST00000423911 575 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 MTND3P21-201ENST00000433774 331 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 MTATP6P16-201ENST00000434543 526 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 PSPHP1-201ENST00000450062 261 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 RPL31P60-201ENST00000478450 367 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 RN7SKP258-201ENST00000517151 304 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.37□□□□□ -1.87
SIN3AQ96ST3 SYF2P1-201ENST00000550658 413 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 RPS3AP4-201ENST00000555161 764 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AP003465.2-201ENST00000602571 373 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 AC025449.1-201ENST00000603896 529 ntBASIC3.37□□□□□ -1.87
SIN3AQ96ST3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms