Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RPL7AP25-201ENST00000423357 805 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 EIF4HP2-201ENST00000424380 563 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 MTCO1P44-201ENST00000441935 243 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AL360271.2-201ENST00000447710 161 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AC079354.2-201ENST00000453523 154 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AC234775.1-201ENST00000454247 670 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 RNU6-638P-201ENST00000516582 104 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 RN7SKP60-201ENST00000516985 239 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 IGLVIV-65-201ENST00000517313 360 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AC123912.5-201ENST00000605470 343 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AC091979.2-201ENST00000607514 214 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AC011603.4-201ENST00000611325 277 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 MIR8069-1-201ENST00000616627 86 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 MIR8069-2-201ENST00000621412 86 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 RNA5SP196-201ENST00000625967 102 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 NCAPGP1-201ENST00000505112 1814 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
TRIM47Q96LD4 SALL4P2-201ENST00000423288 2910 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 SMG1P6-201ENST00000532337 2930 ntBASIC5.41□□□□□ -1.54
TRIM47Q96LD4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 OR14L1P-202ENST00000641545 3009 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AL672167.1-205ENST00000641112 3080 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 CYCSP33-201ENST00000414485 327 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AC009237.7-201ENST00000447357 229 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 MRPS10P1-201ENST00000448483 130 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AC074290.1-201ENST00000448883 135 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 RNA5SP103-201ENST00000459503 118 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 U8.21-201ENST00000459536 136 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 RPL21P126-201ENST00000470049 478 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 FCF1P8-201ENST00000510322 597 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 RNU6-612P-201ENST00000516909 102 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 SUMO2P18-201ENST00000518873 252 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 MRPL49P2-201ENST00000521066 465 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AC090616.3-201ENST00000582184 217 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AC067852.3-201ENST00000589177 561 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 IPO5P1-202ENST00000600039 287 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AC009314.1-201ENST00000603871 304 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 AP001005.3-201ENST00000622049 129 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 U4.7-201ENST00000638126 106 ntBASIC5.4□□□□□ -1.54
TRIM47Q96LD4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM47Q96LD4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 ZNF137P-201ENST00000456718 1920 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RN7SKP280-201ENST00000364196 304 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 Y_RNA.217-201ENST00000364214 105 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 Y_RNA.324-201ENST00000365165 102 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 Y_RNA.525-201ENST00000384570 113 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RNU6-607P-201ENST00000411283 108 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AC069218.2-201ENST00000411665 344 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RPL7AP73-201ENST00000413490 353 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RPL21P40-201ENST00000428586 483 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 PPIAP13-201ENST00000434706 478 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RPL23AP58-201ENST00000440453 469 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RPL23AP33-201ENST00000442301 452 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 Y_RNA.641-201ENST00000459414 105 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AL591473.1-201ENST00000464297 313 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 VN1R105P-201ENST00000486595 910 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RN7SL558P-201ENST00000497468 299 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RNU6-513P-201ENST00000516104 104 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RN7SKP179-201ENST00000516126 217 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 snoU109.6-201ENST00000516831 118 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AK6P2-201ENST00000549020 471 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 MTND5P34-201ENST00000568888 325 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 AC008749.1-201ENST00000597650 306 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms