Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MIR577-201ENST00000385196 96 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 RNA5SP241-201ENST00000391326 114 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 RNU2-18P-201ENST00000411224 162 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 RPL35AP31-201ENST00000418340 337 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 RNU7-164P-201ENST00000459221 62 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AC005165.2-201ENST00000466070 380 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 RN7SL714P-201ENST00000487050 298 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 RN7SL568P-201ENST00000493069 298 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 YPEL5P2-201ENST00000605553 359 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 MIR6780B-201ENST00000610307 79 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 JPX_2.1-201ENST00000614161 69 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 U6.73-201ENST00000619194 103 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AC010325.3-201ENST00000641084 394 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AC107027.3-201ENST00000565095 3473 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 AC074141.1-201ENST00000588129 2995 ntBASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.53□□□□□ -1.52
MS4A3Q96HJ5 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 RNU6-117P-201ENST00000365415 107 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 UBBP2-201ENST00000376781 231 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AL139095.1-201ENST00000404326 391 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 RPL23AP46-201ENST00000438548 490 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 RPL12P11-201ENST00000439970 501 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 HMGN2P10-201ENST00000448085 265 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AL162739.1-201ENST00000450606 307 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 HMGN2P9-201ENST00000476875 229 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AC093270.2-201ENST00000486157 792 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AC145146.1-201ENST00000496370 254 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AC113410.1-201ENST00000505029 247 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 SNORD116-26-201ENST00000516006 96 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 RN7SKP276-201ENST00000516242 268 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 SNORA74.1-201ENST00000516320 180 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 RNU6-1282P-201ENST00000516735 96 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 Y_RNA.705-201ENST00000516862 110 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AL161713.1-201ENST00000555538 145 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 MIR548Z-201ENST00000584743 97 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AC145423.2-201ENST00000610631 239 ntBASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
MS4A3Q96HJ5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 SNORA18-201ENST00000384416 132 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 RNU6-887P-201ENST00000410660 100 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 RNU4-69P-201ENST00000410677 143 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 RN7SL552P-201ENST00000462094 276 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 RPS27AP10-201ENST00000496103 208 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 RNU7-123P-201ENST00000515911 60 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 Y_RNA.659-201ENST00000515994 113 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 AC022523.2-201ENST00000561045 150 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 MIR4777-201ENST00000583710 86 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 RPSAP75-201ENST00000605848 301 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 MIR6811-201ENST00000620409 58 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 MIR548BB-201ENST00000626714 66 ntBASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms