Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 U3.20-201ENST00000390909 217 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 RPS29P4-201ENST00000414733 161 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.14□□□□□ -1.91
USP43Q70EL4 AC008267.5-201ENST00000424928 265 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AC137499.1-201ENST00000427602 88 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 PSMA6P3-201ENST00000428242 164 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 EZH2P1-201ENST00000431167 291 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 TIMM9P1-201ENST00000436122 256 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP43Q70EL4 PRDX3P3-201ENST00000447765 522 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 MTND3P16-201ENST00000452205 344 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AC104308.1-201ENST00000454621 333 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 PLGLA-201ENST00000465668 449 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 GMFBP1-201ENST00000467831 427 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 TRBV1-201ENST00000476502 284 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP43Q70EL4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.14□□□□□ -1.91
USP43Q70EL4 RN7SKP18-201ENST00000516005 275 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 Y_RNA.665-201ENST00000516177 98 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 SNORA74D-201ENST00000516404 141 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 HMGB1P41-201ENST00000520234 440 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP43Q70EL4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP43Q70EL4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.14□□□□□ -1.91
USP43Q70EL4 SYF2P1-201ENST00000550658 413 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 SETP2-201ENST00000553886 926 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AL161670.1-201ENST00000554348 137 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 MYL12BP1-201ENST00000569826 507 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.14□□□□□ -1.91
USP43Q70EL4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.14□□□□□ -1.91
USP43Q70EL4 CYP2C61P-201ENST00000604072 290 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AP001330.4-201ENST00000604350 154 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AC093913.1-201ENST00000614178 329 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 uc_338.15-201ENST00000615470 191 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AC022418.1-201ENST00000624118 445 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.14□□□□□ -1.91
USP43Q70EL4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP43Q70EL4 AL353746.1-201ENST00000566293 6881 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AL049781.1-201ENST00000623195 3585 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP43Q70EL4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.13□□□□□ -1.91
USP43Q70EL4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
USP43Q70EL4 Y_RNA.149-201ENST00000363558 117 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 RNU4-48P-201ENST00000365559 182 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USP43Q70EL4 MIR183-201ENST00000384958 110 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 SSXP10-201ENST00000402595 565 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 MIR548K-201ENST00000408406 116 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 RNU2-64P-201ENST00000411315 191 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.13□□□□□ -1.91
USP43Q70EL4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.13□□□□□ -1.91
USP43Q70EL4 AL035423.1-201ENST00000420331 213 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.13□□□□□ -1.91
USP43Q70EL4 AC093151.1-201ENST00000427711 313 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 ATP5JP1-201ENST00000431631 322 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AL160004.2-201ENST00000432935 350 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.13□□□□□ -1.91
USP43Q70EL4 RPS20P5-201ENST00000434808 360 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 HSPD1P21-201ENST00000436541 245 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.13□□□□□ -1.91
USP43Q70EL4 AC093156.1-201ENST00000440382 670 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
USP43Q70EL4 BTF3P15-201ENST00000455606 336 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 RNU7-66P-201ENST00000459469 62 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC007547.1-201ENST00000462177 490 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC021382.1-201ENST00000483523 359 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC106707.2-201ENST00000484182 374 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC068781.1-201ENST00000488231 618 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.13□□□□□ -1.91
USP43Q70EL4 MTCO1P29-201ENST00000496868 288 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.13□□□□□ -1.91
USP43Q70EL4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 RNU6-388P-201ENST00000517012 105 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 RNU6-389P-201ENST00000517048 105 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 RN7SKP295-201ENST00000517264 153 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 OR4P1P-201ENST00000530808 1136 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
USP43Q70EL4 BNIP3P6-201ENST00000549284 499 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.13□□□□□ -1.91
USP43Q70EL4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.13□□□□□ -1.91
USP43Q70EL4 AC090615.1-201ENST00000577519 154 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC060771.1-201ENST00000582031 164 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 GLUD1P4-201ENST00000590914 418 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC068790.3-201ENST00000602988 553 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AL022345.1-201ENST00000607292 135 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC004832.5-201ENST00000608677 401 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 AC103710.2-201ENST00000609912 942 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.13□□□□□ -1.91
USP43Q70EL4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP43Q70EL4 ASNSP3-201ENST00000451989 1306 ntBASIC3.13□□□□□ -1.91
USP43Q70EL4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP43Q70EL4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP43Q70EL4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
USP43Q70EL4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP43Q70EL4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
USP43Q70EL4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms