Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC026371.1-201ENST00000551867 419 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 LINC02211-204ENST00000642024 1070 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 SNORD114-31-201ENST00000363219 75 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 Y_RNA.468-201ENST00000384298 102 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC013410.2-201ENST00000422627 201 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 HMGN2P16-201ENST00000456802 261 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC135999.1-201ENST00000478962 479 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 SNRPGP15-201ENST00000600149 222 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 MIR6516-201ENST00000630554 81 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC004987.4-201ENST00000603383 338 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 SNORD14A-201ENST00000606526 91 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 AC022202.1-201ENST00000613515 211 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
VPS13CQ709C8 RNU6-514P-201ENST00000384208 107 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 COL6A4P2-205ENST00000509855 506 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 AC108120.2-201ENST00000512973 294 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 SNORA31.18-201ENST00000517043 134 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 AP003049.1-201ENST00000529418 457 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 NUTF2P8-201ENST00000604593 363 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 AC106791.2-201ENST00000604680 391 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.13□□□□□ -2.39
VPS13CQ709C8 FAM157B-203ENST00000639350 358 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.13□□□□□ -2.39
VPS13CQ709C8 Y_RNA.100-201ENST00000363141 102 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 AC244023.1-201ENST00000426884 112 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 SCARNA11.3-201ENST00000517276 130 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.13□□□□□ -2.39
VPS13CQ709C8 AC242498.1-201ENST00000604134 111 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.13□□□□□ -2.39
VPS13CQ709C8 AC243994.1-201ENST00000618627 109 ntBASIC0.13□□□□□ -2.39
VPS13CQ709C8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
VPS13CQ709C8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS13CQ709C8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
VPS13CQ709C8 PSMC1P5-201ENST00000512850 177 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC112206.3-201ENST00000514578 389 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 MIR3198-2-201ENST00000577868 80 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC110079.1-202ENST00000635213 138 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.12□□□□□ -2.39
VPS13CQ709C8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
VPS13CQ709C8 MIR411-201ENST00000362239 96 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 RPL21P111-201ENST00000418453 477 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS13CQ709C8 CYP2C59P-201ENST00000457790 269 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 RPL23AP54-201ENST00000495129 419 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC012254.4-201ENST00000588843 273 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC123786.2-201ENST00000603459 275 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC135507.1-201ENST00000607214 561 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 SNORD115-41-201ENST00000363608 82 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC112518.2-201ENST00000508565 425 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 RNU1-61P-201ENST00000516107 151 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS13CQ709C8 AC007038.2-201ENST00000608095 740 ntBASIC0.12□□□□□ -2.39
VPS13CQ709C8 RNA5SP252-201ENST00000391131 119 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
VPS13CQ709C8 AL034418.1-201ENST00000448675 860 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 ARPC3P5-201ENST00000448802 534 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 RNA5SP468-201ENST00000516782 93 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
VPS13CQ709C8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.11□□□□□ -2.39
VPS13CQ709C8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 RNY3P5-201ENST00000384127 102 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 Y_RNA.559-201ENST00000384686 107 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 RPL37P10-201ENST00000412884 288 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC009518.2-201ENST00000418056 731 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC010301.1-201ENST00000473936 355 ntBASIC0.11□□□□□ -2.39
VPS13CQ709C8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.11□□□□□ -2.39
VPS13CQ709C8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
VPS13CQ709C8 Y_RNA.413-201ENST00000384007 102 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 MT-TQ-201ENST00000387372 72 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 NDUFB4P10-201ENST00000452541 359 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 Y_RNA.754-201ENST00000476024 102 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 RNU6-1004P-201ENST00000516584 111 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 RNU6-889P-201ENST00000517189 103 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms