Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC138393.1-203ENST00000327086 343 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-562P-201ENST00000362731 107 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-395P-201ENST00000365662 106 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 SNORD116-29-201ENST00000384516 83 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 MIR325-201ENST00000385260 98 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 U3.42-201ENST00000408746 214 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-607P-201ENST00000411283 108 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-1304P-201ENST00000411374 106 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AL353621.1-201ENST00000418219 243 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-1231P-201ENST00000517185 103 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AC087854.1-201ENST00000519706 414 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AC093331.1-201ENST00000521474 169 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AC025423.5-201ENST00000550230 219 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 TRAV28-201ENST00000557548 323 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 MIR4700-201ENST00000578311 74 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 LRRC37A5P-203ENST00000580181 585 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AC053481.4-201ENST00000583164 216 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AC093227.2-201ENST00000589357 285 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 SNORA62.6-201ENST00000606322 83 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 RMST_8.1-201ENST00000610287 165 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AL732372.2-225ENST00000642124 456 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 MIR372-201ENST00000362225 67 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-128P-201ENST00000383976 107 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RNU1-13P-201ENST00000384499 162 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-1197P-201ENST00000391183 107 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 SAR1AP2-201ENST00000392696 594 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RNU2-3P-201ENST00000410144 191 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 CYCSP33-201ENST00000414485 327 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 MTCO2P27-201ENST00000420740 428 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 AL590632.1-201ENST00000424289 371 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RPL7P37-201ENST00000425095 738 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 SKA2P1-201ENST00000425592 390 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 MTCO2P12-201ENST00000427426 682 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 FABP5P14-201ENST00000437273 393 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RNU1-86P-201ENST00000516108 154 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RNU1-107P-201ENST00000516617 154 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 TRAV37-201ENST00000553906 342 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 TGIF1P1-201ENST00000558095 802 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 AL627309.6-201ENST00000606857 840 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 MTND4P23-201ENST00000447723 1363 ntBASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD4Q6ZW05 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 SNORD3E-201ENST00000362899 217 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-213P-201ENST00000384051 104 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 AL360182.1-201ENST00000397433 468 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 MIR1302-11-201ENST00000408051 138 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 MIR1302-9-201ENST00000408365 138 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 MIR1302-10-201ENST00000408734 138 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-370P-201ENST00000411008 104 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 AF228730.4-201ENST00000421457 183 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 HMGB1P9-201ENST00000429856 646 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 SNAP23P1-201ENST00000433229 246 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 GOT2P5-201ENST00000433995 546 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 AC092573.2-201ENST00000434546 243 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 NDUFB4P6-201ENST00000436819 366 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 Z82210.1-201ENST00000440037 231 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 AL359672.1-201ENST00000442302 409 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 AC006483.1-201ENST00000487308 313 ntBASIC3.36□□□□□ -1.87
PTCHD4Q6ZW05 AC139453.3-201ENST00000493276 369 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms