Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 Z73965.1-201ENST00000623412 2297 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 SNORA36C-201ENST00000384289 132 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 Y_RNA.534-201ENST00000384599 112 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 RNU6-1109P-201ENST00000391187 107 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AL513331.1-201ENST00000411908 397 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 RPS29P4-201ENST00000414733 161 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 RPS12P23-201ENST00000419579 400 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AP000907.1-201ENST00000428428 510 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AL031274.1-201ENST00000450334 232 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 RPL23AP31-201ENST00000456160 467 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC112492.4-201ENST00000456549 352 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC010469.1-201ENST00000463864 576 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 RPS23P3-201ENST00000470993 430 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 HSPE1P6-201ENST00000479457 291 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 PPIAP15-201ENST00000479662 484 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 RPL17P19-201ENST00000489069 552 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC069499.1-201ENST00000489433 509 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 UBE2CP3-201ENST00000502715 450 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC008716.1-201ENST00000511084 513 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC074250.1-201ENST00000511117 192 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC131281.1-201ENST00000522984 164 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 MIR4273-201ENST00000582824 84 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 SNORD58B-201ENST00000607313 66 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC107294.1-201ENST00000609524 467 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC015813.4-201ENST00000610469 179 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 AC034102.8-201ENST00000615146 484 ntBASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40BQ6NWY9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 SNORD35B-201ENST00000363660 87 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 RNA5SP72-201ENST00000364442 117 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 RNU6-784P-201ENST00000384330 106 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 SNORA3.3-201ENST00000408712 125 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AL030996.1-201ENST00000411430 235 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 BX276092.3-201ENST00000424182 230 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AL158071.1-201ENST00000430315 461 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 HSPD1P21-201ENST00000436541 245 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AL049874.1-201ENST00000489560 388 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AC104564.1-201ENST00000493028 407 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 RNA5SP154-201ENST00000516193 111 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 RNU6-927P-201ENST00000516199 100 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 SCARNA14-201ENST00000516903 136 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AL591516.1-201ENST00000611326 274 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 AC009812.4-201ENST00000569134 1805 ntBASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF40BQ6NWY9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 Y_RNA.210-201ENST00000364161 110 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 Y_RNA.324-201ENST00000365165 102 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 SNORD14.1-201ENST00000365609 90 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 MIR301A-201ENST00000385261 86 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 LAP3P1-201ENST00000403648 294 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 RNU6-607P-201ENST00000411283 108 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 APOOP4-201ENST00000513530 597 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 RNU7-143P-201ENST00000516781 65 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 MIR3922-201ENST00000585192 84 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 Z98751.3-201ENST00000604447 521 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 U3.45-201ENST00000607547 219 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40BQ6NWY9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF40BQ6NWY9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF40BQ6NWY9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF40BQ6NWY9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.9□□□□□ -1.62
PRPF40BQ6NWY9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.9□□□□□ -1.62
PRPF40BQ6NWY9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF40BQ6NWY9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.62
PRPF40BQ6NWY9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms