Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.16□□□□□ -1.9
LTBQ06643 AC005741.1-201ENST00000511094 432 ntBASIC3.16□□□□□ -1.9
LTBQ06643 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.16□□□□□ -1.9
LTBQ06643 AC026801.2-201ENST00000515352 425 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AP006587.4-201ENST00000526053 529 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AP000763.2-201ENST00000540641 163 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC011602.1-201ENST00000546484 331 ntBASIC3.16□□□□□ -1.9
LTBQ06643 EIF4BP1-201ENST00000554881 351 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.16□□□□□ -1.9
LTBQ06643 AC012493.2-201ENST00000595083 291 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AL670379.6-201ENST00000603753 252 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC092747.3-201ENST00000603769 301 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AL360085.1-201ENST00000604713 532 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC008162.1-201ENST00000604718 254 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AL670379.1-201ENST00000604752 252 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AL670379.5-201ENST00000605253 252 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AL670379.8-201ENST00000605353 252 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AL670379.7-201ENST00000605823 252 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC084781.2-201ENST00000615568 161 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC090971.5-201ENST00000621102 293 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AP003355.3-201ENST00000623465 114 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC006386.2-201ENST00000624491 75 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC012005.1-201ENST00000624575 75 ntBASIC3.16□□□□□ -1.9
LTBQ06643 MIR7153-201ENST00000637758 57 ntBASIC3.16□□□□□ -1.9
LTBQ06643 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.16□□□□□ -1.9
LTBQ06643 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LTBQ06643 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LTBQ06643 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LTBQ06643 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
LTBQ06643 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LTBQ06643 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LTBQ06643 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
LTBQ06643 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.15□□□□□ -1.9
LTBQ06643 SRP72P2-201ENST00000344851 1979 ntBASIC3.15□□□□□ -1.91
LTBQ06643 MIR369-201ENST00000362155 70 ntBASIC3.15□□□□□ -1.91
LTBQ06643 RNU6-254P-201ENST00000363377 107 ntBASIC3.15□□□□□ -1.91
LTBQ06643 RNU6-82P-201ENST00000363970 107 ntBASIC3.15□□□□□ -1.91
LTBQ06643 Y_RNA.315-201ENST00000365117 102 ntBASIC3.15□□□□□ -1.91
LTBQ06643 SNORD42.2-201ENST00000365570 69 ntBASIC3.15□□□□□ -1.91
LTBQ06643 RNU6-1013P-201ENST00000384180 107 ntBASIC3.15□□□□□ -1.91
LTBQ06643 RNU6-1297P-201ENST00000384415 104 ntBASIC3.15□□□□□ -1.91
LTBQ06643 U3.19-201ENST00000390893 196 ntBASIC3.15□□□□□ -1.91
LTBQ06643 NDUFS5P1-201ENST00000405668 289 ntBASIC3.15□□□□□ -1.91
LTBQ06643 COTL1P1-201ENST00000422309 375 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.15□□□□□ -1.91
LTBQ06643 AC005326.1-201ENST00000429197 123 ntBASIC3.15□□□□□ -1.91
LTBQ06643 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.15□□□□□ -1.91
LTBQ06643 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.15□□□□□ -1.91
LTBQ06643 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.15□□□□□ -1.91
LTBQ06643 GTF2IP13-201ENST00000438487 386 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.15□□□□□ -1.91
LTBQ06643 AL357552.1-201ENST00000445254 415 ntBASIC3.15□□□□□ -1.91
LTBQ06643 RPS15AP27-201ENST00000449183 343 ntBASIC3.15□□□□□ -1.91
LTBQ06643 NIPA2P5-201ENST00000452282 464 ntBASIC3.15□□□□□ -1.91
LTBQ06643 SNORD105B-201ENST00000458770 79 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
LTBQ06643 RPS4XP22-201ENST00000480755 780 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC027575.1-201ENST00000481064 460 ntBASIC3.15□□□□□ -1.91
LTBQ06643 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.15□□□□□ -1.91
LTBQ06643 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.15□□□□□ -1.91
LTBQ06643 MTCO1P29-201ENST00000496868 288 ntBASIC3.15□□□□□ -1.91
LTBQ06643 TRBVA-201ENST00000498804 316 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.15□□□□□ -1.91
LTBQ06643 RNU6-123P-201ENST00000516163 102 ntBASIC3.15□□□□□ -1.91
LTBQ06643 RNU6-390P-201ENST00000516259 103 ntBASIC3.15□□□□□ -1.91
LTBQ06643 RNU2-58P-201ENST00000516403 183 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.15□□□□□ -1.91
LTBQ06643 OR5D17P-201ENST00000531492 978 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AP000889.2-201ENST00000532684 490 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.15□□□□□ -1.91
LTBQ06643 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.15□□□□□ -1.91
LTBQ06643 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.15□□□□□ -1.91
LTBQ06643 AC012182.1-201ENST00000570133 895 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.15□□□□□ -1.91
LTBQ06643 MIR3171-201ENST00000584270 74 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC006116.10-201ENST00000591836 581 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.15□□□□□ -1.91
LTBQ06643 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.15□□□□□ -1.91
LTBQ06643 AL670379.4-201ENST00000605279 254 ntBASIC3.15□□□□□ -1.91
LTBQ06643 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LTBQ06643 AC134503.1-201ENST00000633048 54 ntBASIC3.15□□□□□ -1.91
LTBQ06643 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.15□□□□□ -1.91
LTBQ06643 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
LTBQ06643 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LTBQ06643 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LTBQ06643 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.15□□□□□ -1.91
LTBQ06643 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LTBQ06643 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LTBQ06643 AC103710.2-202ENST00000641454 2853 ntBASIC3.14□□□□□ -1.91
LTBQ06643 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LTBQ06643 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LTBQ06643 MIR30E-201ENST00000362104 92 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AP002088.1-201ENST00000382740 395 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AC110754.1-201ENST00000399740 601 ntBASIC3.14□□□□□ -1.91
LTBQ06643 RNU6-387P-201ENST00000411331 105 ntBASIC3.14□□□□□ -1.91
LTBQ06643 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.14□□□□□ -1.91
LTBQ06643 BTF3L4P3-201ENST00000418879 476 ntBASIC3.14□□□□□ -1.91
LTBQ06643 MTCO2P27-201ENST00000420740 428 ntBASIC3.14□□□□□ -1.91
LTBQ06643 PPP1R11P2-201ENST00000423543 382 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms