Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC130509.1-201ENST00000464158 433 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 SCARNA13-201ENST00000516672 275 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX6-1P78426 GLYCAM1-201ENST00000546596 285 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 AC093027.1-201ENST00000546698 429 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX6-1P78426 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX6-1P78426 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX6-1P78426 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX6-1P78426 AC244505.7-201ENST00000599675 272 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX6-1P78426 AL355365.1-201ENST00000616480 294 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 AC012314.7-201ENST00000619693 93 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX6-1P78426 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX6-1P78426 AP001148.1-201ENST00000624124 2359 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX6-1P78426 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX6-1P78426 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX6-1P78426 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX6-1P78426 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX6-1P78426 MIR423-201ENST00000362201 94 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 SNORA60-201ENST00000362396 134 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-37P-201ENST00000362692 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 Y_RNA.67-201ENST00000362870 100 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-11P-201ENST00000364234 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-7-201ENST00000364784 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 SNORD6-201ENST00000365444 73 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-8-201ENST00000365467 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-25P-201ENST00000383873 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-1-201ENST00000383898 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-48P-201ENST00000384161 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-36P-201ENST00000384172 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-4P-201ENST00000384205 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-5P-201ENST00000384238 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-3P-201ENST00000384314 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-16P-201ENST00000384385 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-15P-201ENST00000384534 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-2-201ENST00000384627 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-29P-201ENST00000384637 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-9-201ENST00000384776 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-33P-201ENST00000384793 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AL391417.1-201ENST00000404100 426 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RN7SKP158-201ENST00000410453 326 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-293P-201ENST00000411259 106 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RPS20P15-201ENST00000412792 311 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AC093578.1-201ENST00000415219 368 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX6-1P78426 SKA2P1-201ENST00000425592 390 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AL691449.1-201ENST00000426570 421 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX6-1P78426 RPS3AP52-201ENST00000435639 297 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX6-1P78426 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX6-1P78426 MTND1P17-201ENST00000448961 204 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 MTND5P5-201ENST00000503764 376 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 HMGN1P11-201ENST00000508668 303 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX6-1P78426 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX6-1P78426 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX6-1P78426 MIR5684-201ENST00000585074 65 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX6-1P78426 SRGNP1-201ENST00000603392 451 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 MIR432-201ENST00000606207 94 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 RNU6-6P-201ENST00000606623 107 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AC010378.1-201ENST00000619270 362 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AL354798.1-201ENST00000622505 329 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 Z69720.2-201ENST00000624755 279 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX6-1P78426 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX6-1P78426 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
NKX6-1P78426 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX6-1P78426 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NKX6-1P78426 HSPA8P1-201ENST00000425843 1833 ntBASIC3.53□□□□□ -1.84
NKX6-1P78426 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NKX6-1P78426 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
NKX6-1P78426 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX6-1P78426 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
NKX6-1P78426 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
NKX6-1P78426 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX6-1P78426 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX6-1P78426 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX6-1P78426 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX6-1P78426 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX6-1P78426 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NKX6-1P78426 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX6-1P78426 RNA5SP119-201ENST00000362715 117 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 RNU6-694P-201ENST00000364071 147 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 Y_RNA.339-201ENST00000365325 102 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 RNU6-1329P-201ENST00000365664 107 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 Y_RNA.431-201ENST00000384086 102 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 Y_RNA.460-201ENST00000384255 102 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 SNORA11.2-201ENST00000408318 127 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 SNORA57.3-201ENST00000411095 141 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 RHEBP3-201ENST00000411920 351 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 RAB9AP3-201ENST00000412737 573 ntBASIC3.52□□□□□ -1.85
NKX6-1P78426 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms