Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 snoU13.22-201ENST00000459428 104 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AC109327.1-201ENST00000471666 403 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AC091167.1-201ENST00000492017 396 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.12□□□□□ -1.75
YBX1P67809 RNU6-911P-201ENST00000516523 104 ntBASIC4.12□□□□□ -1.75
YBX1P67809 SNORA31.22-201ENST00000517204 135 ntBASIC4.12□□□□□ -1.75
YBX1P67809 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.12□□□□□ -1.75
YBX1P67809 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.12□□□□□ -1.75
YBX1P67809 AC034105.4-201ENST00000568304 277 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.12□□□□□ -1.75
YBX1P67809 AC023575.1-201ENST00000580510 358 ntBASIC4.12□□□□□ -1.75
YBX1P67809 MIR3939-201ENST00000582614 106 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.12□□□□□ -1.75
YBX1P67809 AC004792.1-201ENST00000614523 137 ntBASIC4.12□□□□□ -1.75
YBX1P67809 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AP001282.2-201ENST00000616149 309 ntBASIC4.12□□□□□ -1.75
YBX1P67809 Z99571.1-201ENST00000636677 394 ntBASIC4.12□□□□□ -1.75
YBX1P67809 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.12□□□□□ -1.75
YBX1P67809 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
YBX1P67809 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
YBX1P67809 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.12□□□□□ -1.75
YBX1P67809 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.12□□□□□ -1.75
YBX1P67809 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
YBX1P67809 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
YBX1P67809 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
YBX1P67809 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
YBX1P67809 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.11□□□□□ -1.75
YBX1P67809 Z75746.1-201ENST00000440243 2080 ntBASIC4.11□□□□□ -1.75
YBX1P67809 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.11□□□□□ -1.75
YBX1P67809 AL391987.6-201ENST00000305671 199 ntBASIC4.11□□□□□ -1.75
YBX1P67809 Y_RNA.54-201ENST00000362766 105 ntBASIC4.11□□□□□ -1.75
YBX1P67809 Y_RNA.237-201ENST00000364439 102 ntBASIC4.11□□□□□ -1.75
YBX1P67809 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
YBX1P67809 RNA5SP306-201ENST00000411087 107 ntBASIC4.11□□□□□ -1.75
YBX1P67809 RPL23AP26-201ENST00000412728 464 ntBASIC4.11□□□□□ -1.75
YBX1P67809 EI24P1-201ENST00000416584 867 ntBASIC4.11□□□□□ -1.75
YBX1P67809 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.11□□□□□ -1.75
YBX1P67809 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.11□□□□□ -1.75
YBX1P67809 EIF4EP2-201ENST00000422816 654 ntBASIC4.11□□□□□ -1.75
YBX1P67809 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.11□□□□□ -1.75
YBX1P67809 AL592045.1-201ENST00000429867 352 ntBASIC4.11□□□□□ -1.75
YBX1P67809 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.11□□□□□ -1.75
YBX1P67809 USP9YP7-201ENST00000436723 430 ntBASIC4.11□□□□□ -1.75
YBX1P67809 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.11□□□□□ -1.75
YBX1P67809 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.11□□□□□ -1.75
YBX1P67809 USP9YP32-201ENST00000452432 430 ntBASIC4.11□□□□□ -1.75
YBX1P67809 SNORD108-201ENST00000459332 71 ntBASIC4.11□□□□□ -1.75
YBX1P67809 AC104164.2-201ENST00000496953 495 ntBASIC4.11□□□□□ -1.75
YBX1P67809 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.11□□□□□ -1.75
YBX1P67809 RNU5B-3P-201ENST00000516601 115 ntBASIC4.11□□□□□ -1.75
YBX1P67809 RNU6-143P-201ENST00000516942 93 ntBASIC4.11□□□□□ -1.75
YBX1P67809 MIR2116-201ENST00000517221 80 ntBASIC4.11□□□□□ -1.75
YBX1P67809 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.11□□□□□ -1.75
YBX1P67809 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.11□□□□□ -1.75
YBX1P67809 MIR5701-3-201ENST00000578890 82 ntBASIC4.11□□□□□ -1.75
YBX1P67809 MIR5701-1-201ENST00000585138 82 ntBASIC4.11□□□□□ -1.75
YBX1P67809 MIR5701-2-201ENST00000615634 82 ntBASIC4.11□□□□□ -1.75
YBX1P67809 AL445567.2-201ENST00000618935 498 ntBASIC4.11□□□□□ -1.75
YBX1P67809 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.11□□□□□ -1.75
YBX1P67809 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.11□□□□□ -1.75
YBX1P67809 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.11□□□□□ -1.75
YBX1P67809 AC011266.1-201ENST00000624119 3569 ntBASIC4.11□□□□□ -1.75
YBX1P67809 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
YBX1P67809 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
YBX1P67809 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
YBX1P67809 UBE2L2-201ENST00000254302 429 ntBASIC4.1□□□□□ -1.75
YBX1P67809 RNA5SP366-201ENST00000365454 123 ntBASIC4.1□□□□□ -1.75
YBX1P67809 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
YBX1P67809 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.1□□□□□ -1.75
YBX1P67809 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.1□□□□□ -1.75
YBX1P67809 AC092573.2-201ENST00000434546 243 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AC104332.1-201ENST00000440471 797 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.1□□□□□ -1.75
YBX1P67809 SNORA84-201ENST00000459229 133 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AC105137.1-201ENST00000484355 562 ntBASIC4.1□□□□□ -1.75
YBX1P67809 SUMO2P6-201ENST00000505273 288 ntBASIC4.1□□□□□ -1.75
YBX1P67809 RNU1-86P-201ENST00000516108 154 ntBASIC4.1□□□□□ -1.75
YBX1P67809 RNU1-107P-201ENST00000516617 154 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AC006064.5-201ENST00000541782 248 ntBASIC4.1□□□□□ -1.75
YBX1P67809 TVP23BP1-201ENST00000557500 617 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AC106785.1-201ENST00000565935 262 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
YBX1P67809 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.1□□□□□ -1.75
YBX1P67809 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.1□□□□□ -1.75
YBX1P67809 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.1□□□□□ -1.75
YBX1P67809 AC006557.5-201ENST00000603126 811 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AC008962.1-201ENST00000605729 304 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AC023043.4-201ENST00000612081 449 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.1□□□□□ -1.75
YBX1P67809 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
YBX1P67809 AP001148.1-201ENST00000624124 2359 ntBASIC4.1□□□□□ -1.75
YBX1P67809 AC000123.3-201ENST00000624029 4975 ntBASIC4.1□□□□□ -1.75
YBX1P67809 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms