Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH4P55283 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH4P55283 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH4P55283 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH4P55283 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
CDH4P55283 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.18□□□□□ -2.06
CDH4P55283 AC020699.1-201ENST00000505161 445 ntBASIC2.18□□□□□ -2.06
CDH4P55283 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH4P55283 SNORA25.11-201ENST00000515935 105 ntBASIC2.18□□□□□ -2.06
CDH4P55283 RNU6-311P-201ENST00000516224 102 ntBASIC2.18□□□□□ -2.06
CDH4P55283 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDH4P55283 MTATP6P15-201ENST00000527233 835 ntBASIC2.18□□□□□ -2.06
CDH4P55283 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH4P55283 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH4P55283 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH4P55283 BNIP3P9-201ENST00000603714 553 ntBASIC2.18□□□□□ -2.06
CDH4P55283 AC027449.1-201ENST00000608890 407 ntBASIC2.18□□□□□ -2.06
CDH4P55283 ZNF876P-202ENST00000398732 1485 ntBASIC2.18□□□□□ -2.06
CDH4P55283 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH4P55283 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDH4P55283 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDH4P55283 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDH4P55283 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
CDH4P55283 FAM133CP-201ENST00000332869 704 ntBASIC2.17□□□□□ -2.06
CDH4P55283 RNU6-931P-201ENST00000363850 107 ntBASIC2.17□□□□□ -2.06
CDH4P55283 U3.37-201ENST00000408528 213 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH4P55283 ELOCP17-201ENST00000414751 326 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.17□□□□□ -2.06
CDH4P55283 RAC1P6-201ENST00000423911 575 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH4P55283 RPS3AP44-201ENST00000425466 790 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH4P55283 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.17□□□□□ -2.06
CDH4P55283 AL441985.1-201ENST00000457727 251 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.17□□□□□ -2.06
CDH4P55283 RNU5A-4P-201ENST00000516588 111 ntBASIC2.17□□□□□ -2.06
CDH4P55283 CBX3P7-201ENST00000532876 502 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AL133241.1-201ENST00000556832 487 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AL356432.3-201ENST00000568952 465 ntBASIC2.17□□□□□ -2.06
CDH4P55283 MIR4298-201ENST00000584380 73 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH4P55283 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH4P55283 KC877982.1-201ENST00000602313 470 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AC007363.1-201ENST00000604736 620 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH4P55283 AC087241.4-201ENST00000612441 480 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AL050303.3-201ENST00000613704 284 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AC010378.1-201ENST00000619270 362 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AL607023.1-201ENST00000620045 248 ntBASIC2.17□□□□□ -2.06
CDH4P55283 AL589994.2-201ENST00000621124 579 ntBASIC2.17□□□□□ -2.06
CDH4P55283 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDH4P55283 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
CDH4P55283 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH4P55283 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH4P55283 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH4P55283 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH4P55283 SNORD113-6-201ENST00000363345 75 ntBASIC2.16□□□□□ -2.06
CDH4P55283 RNU6-188P-201ENST00000364207 107 ntBASIC2.16□□□□□ -2.06
CDH4P55283 RNU6-14P-201ENST00000384630 106 ntBASIC2.16□□□□□ -2.06
CDH4P55283 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDH4P55283 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
CDH4P55283 AL355497.1-201ENST00000406262 551 ntBASIC2.16□□□□□ -2.06
CDH4P55283 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.16□□□□□ -2.06
CDH4P55283 AL008987.1-201ENST00000415528 237 ntBASIC2.16□□□□□ -2.06
CDH4P55283 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH4P55283 AC003685.2-201ENST00000422795 395 ntBASIC2.16□□□□□ -2.06
CDH4P55283 AC004383.1-201ENST00000438135 289 ntBASIC2.16□□□□□ -2.06
CDH4P55283 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH4P55283 AL606517.1-201ENST00000446914 387 ntBASIC2.16□□□□□ -2.06
CDH4P55283 AL031659.1-201ENST00000447075 539 ntBASIC2.16□□□□□ -2.06
CDH4P55283 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH4P55283 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.16□□□□□ -2.06
CDH4P55283 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH4P55283 AC068781.1-201ENST00000488231 618 ntBASIC2.16□□□□□ -2.06
CDH4P55283 RPL39P36-201ENST00000490784 156 ntBASIC2.16□□□□□ -2.06
CDH4P55283 RPL22P13-201ENST00000493291 347 ntBASIC2.16□□□□□ -2.06
CDH4P55283 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.16□□□□□ -2.06
CDH4P55283 SMURF2P1-201ENST00000514992 481 ntBASIC2.16□□□□□ -2.06
CDH4P55283 RNU6-415P-201ENST00000516252 97 ntBASIC2.16□□□□□ -2.06
CDH4P55283 HSPE1P18-201ENST00000517602 280 ntBASIC2.16□□□□□ -2.06
CDH4P55283 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
CDH4P55283 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH4P55283 AC023050.2-201ENST00000544968 387 ntBASIC2.16□□□□□ -2.06
CDH4P55283 MIR4782-201ENST00000577987 79 ntBASIC2.16□□□□□ -2.06
CDH4P55283 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH4P55283 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.16□□□□□ -2.06
CDH4P55283 AC021755.4-201ENST00000616620 456 ntBASIC2.16□□□□□ -2.06
CDH4P55283 AC012640.5-201ENST00000623897 319 ntBASIC2.16□□□□□ -2.06
CDH4P55283 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.16□□□□□ -2.06
CDH4P55283 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.16□□□□□ -2.06
CDH4P55283 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDH4P55283 RNU6-1280P-201ENST00000365211 107 ntBASIC2.15□□□□□ -2.07
CDH4P55283 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
CDH4P55283 RNU6-253P-201ENST00000384730 105 ntBASIC2.15□□□□□ -2.07
CDH4P55283 OR51A5P-201ENST00000415429 942 ntBASIC2.15□□□□□ -2.07
CDH4P55283 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CDH4P55283 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH4P55283 UBE2FP3-201ENST00000436366 524 ntBASIC2.15□□□□□ -2.07
CDH4P55283 RNU6-953P-201ENST00000459154 107 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms