Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.75□□□□□ -1.97
NEDD4P46934 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NEDD4P46934 Z82195.2-201ENST00000612348 18351 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NEDD4P46934 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NEDD4P46934 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 RNU6-701P-201ENST00000384059 107 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NEDD4P46934 AL445529.1-201ENST00000398713 389 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 RNU6-195P-201ENST00000411352 109 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 BX295541.1-201ENST00000417774 250 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AL139413.1-201ENST00000421309 217 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AC007283.2-201ENST00000424739 197 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AL512844.2-201ENST00000433990 593 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 RPS24P1-201ENST00000438550 371 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 Z82210.1-201ENST00000440037 231 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 PIGFP3-201ENST00000441918 722 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.74□□□□□ -1.97
NEDD4P46934 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NEDD4P46934 EEF1B2P7-201ENST00000451177 676 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AC087190.1-201ENST00000484462 480 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 RNA5SP281-201ENST00000516504 135 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 RNU6-430P-201ENST00000517078 107 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
NEDD4P46934 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.74□□□□□ -1.97
NEDD4P46934 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 AC104763.2-201ENST00000604179 382 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.74□□□□□ -1.97
NEDD4P46934 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AC008498.1-201ENST00000613012 531 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AC091834.1-201ENST00000614543 472 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 AC099842.1-201ENST00000619919 596 ntBASIC2.74□□□□□ -1.97
NEDD4P46934 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NEDD4P46934 Y_RNA.318-201ENST00000365131 97 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 OR5H15-201ENST00000383696 930 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 RNU5A-6P-201ENST00000384136 116 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 Y_RNA.559-201ENST00000384686 107 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 MIR558-201ENST00000384920 94 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 Y_RNA.582-201ENST00000391023 95 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 MED13P1-201ENST00000428342 171 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 VN1R108P-201ENST00000431580 830 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 BNIP3P2-201ENST00000441221 577 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 NEFMP1-201ENST00000443423 1006 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 HIGD1AP2-201ENST00000446367 280 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 AC079781.2-201ENST00000446424 169 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.73□□□□□ -1.97
NEDD4P46934 RNU6-953P-201ENST00000459154 107 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 RPL37P6-201ENST00000460682 294 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NEDD4P46934 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.73□□□□□ -1.97
NEDD4P46934 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NEDD4P46934 AC010486.1-201ENST00000511793 424 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 RNU6-405P-201ENST00000516637 110 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.73□□□□□ -1.97
NEDD4P46934 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.73□□□□□ -1.97
NEDD4P46934 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.73□□□□□ -1.97
NEDD4P46934 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.73□□□□□ -1.97
NEDD4P46934 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.73□□□□□ -1.97
NEDD4P46934 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.73□□□□□ -1.97
NEDD4P46934 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.73□□□□□ -1.97
NEDD4P46934 AL391840.1-201ENST00000571144 367 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 MIR3913-1-201ENST00000577744 102 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 GLUD1P4-201ENST00000590914 418 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 HSPE1P7-201ENST00000604681 321 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 AC007938.3-201ENST00000604965 623 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 NDUFA8P1-201ENST00000605525 367 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 MIR98-201ENST00000606724 119 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 AC116312.1-201ENST00000606841 314 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 AC104073.3-201ENST00000610942 955 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 AL365204.3-201ENST00000612448 685 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 HULC.1-201ENST00000612720 240 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.73□□□□□ -1.97
NEDD4P46934 AC068137.4-201ENST00000638485 296 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 OR5H6-203ENST00000642105 978 ntBASIC2.73□□□□□ -1.97
NEDD4P46934 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.73□□□□□ -1.97
NEDD4P46934 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.72□□□□□ -1.97
NEDD4P46934 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.72□□□□□ -1.97
NEDD4P46934 MTND5P6-201ENST00000422338 1798 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 RNU6-1097P-201ENST00000363586 107 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 RNU1-138P-201ENST00000384093 164 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 RNU6-817P-201ENST00000391083 104 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AL591416.1-201ENST00000404015 867 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 RNU2-16P-201ENST00000410712 136 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.72□□□□□ -1.97
NEDD4P46934 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.72□□□□□ -1.97
NEDD4P46934 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.72□□□□□ -1.97
NEDD4P46934 AC133104.1-201ENST00000429100 218 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AC007919.1-201ENST00000429380 217 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AC104332.2-201ENST00000429959 156 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 RPL31P35-201ENST00000431058 377 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AC093392.2-201ENST00000450682 337 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.72□□□□□ -1.97
NEDD4P46934 AC008413.1-201ENST00000511864 177 ntBASIC2.72□□□□□ -1.97
NEDD4P46934 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms