Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MIR4443-201ENST00000585052 53 ntBASIC4.04□□□□□ -1.76
GDNFP39905 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.04□□□□□ -1.76
GDNFP39905 AC011921.3-201ENST00000605540 361 ntBASIC4.04□□□□□ -1.76
GDNFP39905 AC091953.5-201ENST00000622919 233 ntBASIC4.04□□□□□ -1.76
GDNFP39905 AC018445.2-201ENST00000622987 260 ntBASIC4.04□□□□□ -1.76
GDNFP39905 AP002799.1-201ENST00000623552 423 ntBASIC4.04□□□□□ -1.76
GDNFP39905 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
GDNFP39905 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
GDNFP39905 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
GDNFP39905 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GDNFP39905 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GDNFP39905 AC008725.1-201ENST00000605123 2263 ntBASIC4.04□□□□□ -1.76
GDNFP39905 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
GDNFP39905 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 RNA5SP305-201ENST00000362665 119 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RNA5SP123-201ENST00000363244 119 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RNU6-326P-201ENST00000365480 107 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RPL23AP48-201ENST00000406913 488 ntBASIC4.03□□□□□ -1.76
GDNFP39905 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.03□□□□□ -1.76
GDNFP39905 RNU6-394P-201ENST00000410735 107 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RN7SKP167-201ENST00000411047 285 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RNU2-61P-201ENST00000411069 191 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RPL19P1-201ENST00000411635 428 ntBASIC4.03□□□□□ -1.76
GDNFP39905 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.03□□□□□ -1.76
GDNFP39905 AC005002.2-201ENST00000438228 269 ntBASIC4.03□□□□□ -1.76
GDNFP39905 NUTF2P3-201ENST00000448540 384 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RPL23AP56-201ENST00000460778 453 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RPL7AP6-201ENST00000477943 801 ntBASIC4.03□□□□□ -1.76
GDNFP39905 AC093270.2-201ENST00000486157 792 ntBASIC4.03□□□□□ -1.76
GDNFP39905 RN7SL97P-201ENST00000486780 299 ntBASIC4.03□□□□□ -1.76
GDNFP39905 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.03□□□□□ -1.76
GDNFP39905 RNU6-377P-201ENST00000515965 102 ntBASIC4.03□□□□□ -1.76
GDNFP39905 ATP5F1P5-201ENST00000526403 760 ntBASIC4.03□□□□□ -1.76
GDNFP39905 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.03□□□□□ -1.76
GDNFP39905 AL121603.1-201ENST00000553815 142 ntBASIC4.03□□□□□ -1.76
GDNFP39905 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.03□□□□□ -1.76
GDNFP39905 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
GDNFP39905 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.03□□□□□ -1.76
GDNFP39905 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.03□□□□□ -1.76
GDNFP39905 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
GDNFP39905 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GDNFP39905 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
GDNFP39905 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.03□□□□□ -1.77
GDNFP39905 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
GDNFP39905 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GDNFP39905 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GDNFP39905 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GDNFP39905 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.02□□□□□ -1.77
GDNFP39905 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GDNFP39905 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GDNFP39905 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.02□□□□□ -1.77
GDNFP39905 SNORA74A-201ENST00000364089 198 ntBASIC4.02□□□□□ -1.77
GDNFP39905 Y_RNA.240-201ENST00000364469 95 ntBASIC4.02□□□□□ -1.77
GDNFP39905 RNU6-923P-201ENST00000364753 107 ntBASIC4.02□□□□□ -1.77
GDNFP39905 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.02□□□□□ -1.77
GDNFP39905 SNORA70-201ENST00000384436 135 ntBASIC4.02□□□□□ -1.77
GDNFP39905 RNU6-1117P-201ENST00000384525 104 ntBASIC4.02□□□□□ -1.77
GDNFP39905 MIR514A1-201ENST00000385133 98 ntBASIC4.02□□□□□ -1.77
GDNFP39905 RNU6-918P-201ENST00000391219 106 ntBASIC4.02□□□□□ -1.77
GDNFP39905 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.02□□□□□ -1.77
GDNFP39905 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.02□□□□□ -1.77
GDNFP39905 AC140479.3-201ENST00000418944 1126 ntBASIC4.02□□□□□ -1.77
GDNFP39905 AL138785.1-201ENST00000425821 331 ntBASIC4.02□□□□□ -1.77
GDNFP39905 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.02□□□□□ -1.77
GDNFP39905 snoU13.30-201ENST00000458951 104 ntBASIC4.02□□□□□ -1.77
GDNFP39905 AC087477.1-201ENST00000465747 340 ntBASIC4.02□□□□□ -1.77
GDNFP39905 RPL21P13-201ENST00000488305 481 ntBASIC4.02□□□□□ -1.77
GDNFP39905 AC140172.1-201ENST00000502928 141 ntBASIC4.02□□□□□ -1.77
GDNFP39905 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.02□□□□□ -1.77
GDNFP39905 H3F3AP1-201ENST00000559984 334 ntBASIC4.02□□□□□ -1.77
GDNFP39905 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.02□□□□□ -1.77
GDNFP39905 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
GDNFP39905 AC091178.1-203ENST00000584586 279 ntBASIC4.02□□□□□ -1.77
GDNFP39905 AC010928.2-201ENST00000588017 287 ntBASIC4.02□□□□□ -1.77
GDNFP39905 AL121932.1-201ENST00000605542 214 ntBASIC4.02□□□□□ -1.77
GDNFP39905 AC037487.3-201ENST00000606668 112 ntBASIC4.02□□□□□ -1.77
GDNFP39905 SNORD113-5-201ENST00000607261 78 ntBASIC4.02□□□□□ -1.77
GDNFP39905 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GDNFP39905 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.02□□□□□ -1.77
GDNFP39905 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GDNFP39905 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GDNFP39905 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
GDNFP39905 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
GDNFP39905 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GDNFP39905 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
GDNFP39905 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GDNFP39905 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
GDNFP39905 RNU6-1290P-201ENST00000362957 109 ntBASIC4.01□□□□□ -1.77
GDNFP39905 Y_RNA.81-201ENST00000362997 102 ntBASIC4.01□□□□□ -1.77
GDNFP39905 RNA5SP513-201ENST00000364648 118 ntBASIC4.01□□□□□ -1.77
GDNFP39905 RNU6-336P-201ENST00000364891 107 ntBASIC4.01□□□□□ -1.77
GDNFP39905 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms