Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.87□□□□□ -2.11
CD74P04233 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.87□□□□□ -2.11
CD74P04233 IGHVIII-44-202ENST00000636235 289 ntBASIC1.87□□□□□ -2.11
CD74P04233 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
CD74P04233 MTND5P29-201ENST00000458676 1807 ntBASIC1.87□□□□□ -2.11
CD74P04233 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.86□□□□□ -2.11
CD74P04233 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CD74P04233 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.86□□□□□ -2.11
CD74P04233 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.86□□□□□ -2.11
CD74P04233 RNY4P24-201ENST00000362735 96 ntBASIC1.86□□□□□ -2.11
CD74P04233 RNU5F-6P-201ENST00000362979 116 ntBASIC1.86□□□□□ -2.11
CD74P04233 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CD74P04233 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
CD74P04233 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.86□□□□□ -2.11
CD74P04233 HMGB1P27-201ENST00000431429 603 ntBASIC1.86□□□□□ -2.11
CD74P04233 GPM6BP2-201ENST00000432046 144 ntBASIC1.86□□□□□ -2.11
CD74P04233 RPL36AP53-201ENST00000432891 316 ntBASIC1.86□□□□□ -2.11
CD74P04233 MTND4P25-201ENST00000441039 533 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC118469.1-201ENST00000442943 488 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC124916.1-201ENST00000444020 547 ntBASIC1.86□□□□□ -2.11
CD74P04233 GPM6BP1-201ENST00000446387 144 ntBASIC1.86□□□□□ -2.11
CD74P04233 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.86□□□□□ -2.11
CD74P04233 AL021397.1-201ENST00000451806 248 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.86□□□□□ -2.11
CD74P04233 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.86□□□□□ -2.11
CD74P04233 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC109486.1-201ENST00000486833 374 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.86□□□□□ -2.11
CD74P04233 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.86□□□□□ -2.11
CD74P04233 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.86□□□□□ -2.11
CD74P04233 RNA5SP24-201ENST00000516478 95 ntBASIC1.86□□□□□ -2.11
CD74P04233 RNU7-193P-201ENST00000516723 65 ntBASIC1.86□□□□□ -2.11
CD74P04233 MIR514B-201ENST00000516774 80 ntBASIC1.86□□□□□ -2.11
CD74P04233 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
CD74P04233 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
CD74P04233 RNU6-1003P-201ENST00000517099 105 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.86□□□□□ -2.11
CD74P04233 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.86□□□□□ -2.11
CD74P04233 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.86□□□□□ -2.11
CD74P04233 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.86□□□□□ -2.11
CD74P04233 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.86□□□□□ -2.11
CD74P04233 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.86□□□□□ -2.11
CD74P04233 AC007151.1-201ENST00000572774 483 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.86□□□□□ -2.11
CD74P04233 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC105129.3-201ENST00000605455 485 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC087683.2-201ENST00000611384 326 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC068057.2-201ENST00000624047 895 ntBASIC1.86□□□□□ -2.11
CD74P04233 AC010149.2-201ENST00000637608 315 ntBASIC1.86□□□□□ -2.11
CD74P04233 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CD74P04233 RNU6-288P-201ENST00000363690 104 ntBASIC1.85□□□□□ -2.11
CD74P04233 RNU6-1284P-201ENST00000363701 100 ntBASIC1.85□□□□□ -2.11
CD74P04233 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CD74P04233 RNU6-533P-201ENST00000384144 107 ntBASIC1.85□□□□□ -2.11
CD74P04233 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
CD74P04233 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CD74P04233 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CD74P04233 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CD74P04233 RNU2-68P-201ENST00000410878 191 ntBASIC1.85□□□□□ -2.11
CD74P04233 RPL17P12-201ENST00000413391 526 ntBASIC1.85□□□□□ -2.11
CD74P04233 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
CD74P04233 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.85□□□□□ -2.11
CD74P04233 AC005005.2-201ENST00000420779 380 ntBASIC1.85□□□□□ -2.11
CD74P04233 SKA2P1-201ENST00000425592 390 ntBASIC1.85□□□□□ -2.11
CD74P04233 MED14P1-201ENST00000430517 648 ntBASIC1.85□□□□□ -2.11
CD74P04233 AL365184.2-201ENST00000431139 435 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.85□□□□□ -2.11
CD74P04233 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.85□□□□□ -2.11
CD74P04233 NEFMP1-201ENST00000443423 1006 ntBASIC1.85□□□□□ -2.11
CD74P04233 RPL32P28-201ENST00000443577 397 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.85□□□□□ -2.11
CD74P04233 ZNF114P1-201ENST00000453500 292 ntBASIC1.85□□□□□ -2.11
CD74P04233 SSXP1-201ENST00000453640 473 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.85□□□□□ -2.11
CD74P04233 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.85□□□□□ -2.11
CD74P04233 AC022493.1-201ENST00000492984 337 ntBASIC1.85□□□□□ -2.11
CD74P04233 RPS27AP10-201ENST00000496103 208 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC026801.1-201ENST00000497178 464 ntBASIC1.85□□□□□ -2.11
CD74P04233 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.85□□□□□ -2.11
CD74P04233 AC234781.5-201ENST00000508429 271 ntBASIC1.85□□□□□ -2.11
CD74P04233 MIR892C-201ENST00000516410 77 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC107934.1-201ENST00000522215 217 ntBASIC1.85□□□□□ -2.11
CD74P04233 AP006587.4-201ENST00000526053 529 ntBASIC1.85□□□□□ -2.11
CD74P04233 ARL2BPP2-201ENST00000550907 489 ntBASIC1.85□□□□□ -2.11
CD74P04233 ZNF519P3-201ENST00000557158 1032 ntBASIC1.85□□□□□ -2.11
CD74P04233 AL138976.2-201ENST00000563989 694 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC009094.1-201ENST00000564443 426 ntBASIC1.85□□□□□ -2.11
CD74P04233 PCMTD1P2-201ENST00000565017 355 ntBASIC1.85□□□□□ -2.11
CD74P04233 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.85□□□□□ -2.11
CD74P04233 MTATP6P24-201ENST00000576835 677 ntBASIC1.85□□□□□ -2.11
CD74P04233 MIR3945-201ENST00000581853 98 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.85□□□□□ -2.11
CD74P04233 AC007621.1-201ENST00000604544 437 ntBASIC1.85□□□□□ -2.11
CD74P04233 APOOP1-201ENST00000604695 592 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC121334.2-201ENST00000605387 271 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC010678.1-201ENST00000614118 713 ntBASIC1.85□□□□□ -2.11
CD74P04233 MIR6817-201ENST00000615588 66 ntBASIC1.85□□□□□ -2.11
CD74P04233 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CD74P04233 AC009159.2-201ENST00000617603 606 ntBASIC1.85□□□□□ -2.11
CD74P04233 AL589994.2-201ENST00000621124 579 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms