Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR5701-3-201ENST00000578890 82 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 RN7SL753P-201ENST00000581238 290 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 MIR4436B2-201ENST00000581415 91 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM13O60858 MIR4436B1-201ENST00000583272 91 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 MIR5701-1-201ENST00000585138 82 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM13O60858 AL158827.2-201ENST00000602494 330 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 AC174048.1-201ENST00000603389 144 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 MIR6780A-201ENST00000615089 68 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 MIR5701-2-201ENST00000615634 82 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM13O60858 AL691447.3-201ENST00000635020 330 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM13O60858 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM13O60858 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
TRIM13O60858 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM13O60858 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM13O60858 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM13O60858 AC005183.1-201ENST00000603687 1979 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM13O60858 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TRIM13O60858 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM13O60858 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM13O60858 RNU6-1290P-201ENST00000362957 109 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 Y_RNA.458-201ENST00000384240 102 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 SNORD73A-201ENST00000386062 65 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 RNU4-65P-201ENST00000410473 140 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AL356535.1-201ENST00000440335 398 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM13O60858 RN7SL98P-201ENST00000462271 300 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AC109327.1-201ENST00000471666 403 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 S100A11P1-201ENST00000477525 312 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AL359273.1-201ENST00000510918 627 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM13O60858 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM13O60858 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM13O60858 Y_RNA.689-201ENST00000516589 107 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AC069113.1-201ENST00000517763 267 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM13O60858 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM13O60858 MRPS36P4-201ENST00000534436 298 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM13O60858 AL360157.1-201ENST00000565962 87 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM13O60858 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM13O60858 MIR4300-201ENST00000581016 96 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 RNU6-85P-201ENST00000605989 107 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 FAM27D1-201ENST00000612308 341 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 U2.14-201ENST00000615943 113 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AC091953.3-201ENST00000623220 236 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 AC110801.1-201ENST00000623590 212 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM13O60858 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM13O60858 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM13O60858 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM13O60858 AC025031.4-201ENST00000621248 3271 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM13O60858 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM13O60858 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM13O60858 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM13O60858 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM13O60858 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM13O60858 ZNF285B-201ENST00000561698 1767 ntBASIC4.07□□□□□ -1.76
TRIM13O60858 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM13O60858 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM13O60858 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM13O60858 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM13O60858 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM13O60858 RNA5SP502-201ENST00000362694 119 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 RNA5SP513-201ENST00000364648 118 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 RNU6-1117P-201ENST00000384525 104 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 RPS29P13-201ENST00000402041 169 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 AC092809.3-201ENST00000415453 231 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 AC007098.1-201ENST00000420122 367 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM13O60858 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM13O60858 RPL23AP46-201ENST00000438548 490 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 AL513124.1-201ENST00000450410 614 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 AC008481.1-201ENST00000463278 396 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM13O60858 RPL23AP2-201ENST00000471227 466 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 RNU6-1095P-201ENST00000516148 108 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 IGLVIV-65-201ENST00000517313 360 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM13O60858 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM13O60858 RPL23AP87-202ENST00000573039 466 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 AC136932.1-201ENST00000574771 208 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM13O60858 CPDP1-201ENST00000579660 283 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 Z83818.1-201ENST00000603584 150 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 MIR376A1-201ENST00000616574 68 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 AC004825.2-201ENST00000616634 455 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 MIR6130-201ENST00000619419 109 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 AL365265.1-201ENST00000621045 234 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
TRIM13O60858 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM13O60858 RLIMP1-201ENST00000339626 1680 ntBASIC4.06□□□□□ -1.76
TRIM13O60858 Z75746.1-201ENST00000440243 2080 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms