Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ACTN4O43707 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTN4O43707 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTN4O43707 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ACTN4O43707 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTN4O43707 AL365440.1-201ENST00000436135 2167 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.49□□□□□ -1.53
ACTN4O43707 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTN4O43707 RNU6-146P-201ENST00000384602 108 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 MIR223-201ENST00000385204 110 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 Z82210.1-201ENST00000440037 231 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 AL078601.1-201ENST00000444542 271 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.49□□□□□ -1.53
ACTN4O43707 RN7SL30P-201ENST00000488416 306 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.49□□□□□ -1.53
ACTN4O43707 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.49□□□□□ -1.53
ACTN4O43707 AC022616.8-201ENST00000533569 253 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 CYCSP26-201ENST00000534107 320 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 AC007225.2-201ENST00000562529 256 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 AL390726.5-202ENST00000564800 256 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.49□□□□□ -1.53
ACTN4O43707 MIR8069-1-201ENST00000616627 86 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 MIR8069-2-201ENST00000621412 86 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 AC048347.1-201ENST00000624621 427 ntBASIC5.49□□□□□ -1.53
ACTN4O43707 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
ACTN4O43707 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ACTN4O43707 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ACTN4O43707 AC007390.2-201ENST00000606229 3803 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTN4O43707 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
ACTN4O43707 PHKBP1-201ENST00000450951 1951 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ACTN4O43707 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ACTN4O43707 RNU6-270P-201ENST00000364131 105 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 SNORA29-201ENST00000384183 140 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 RNU6-376P-201ENST00000384731 106 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 MIR1271-201ENST00000408537 86 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 RNU6-1064P-201ENST00000410626 104 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.48□□□□□ -1.53
ACTN4O43707 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 RPL23AP58-201ENST00000440453 469 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 RN7SL727P-201ENST00000482164 296 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 RPL31P13-201ENST00000484151 370 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 AC139453.3-201ENST00000493276 369 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 RN7SL244P-201ENST00000493405 297 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 AC008953.1-201ENST00000497334 318 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 AC092490.3-201ENST00000545370 572 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTN4O43707 AC233702.9-201ENST00000581528 203 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.48□□□□□ -1.53
ACTN4O43707 AL590392.1-201ENST00000604960 446 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 AC011603.4-201ENST00000611325 277 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 SCARNA4-202ENST00000625402 129 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 MIR3658-201ENST00000636291 56 ntBASIC5.48□□□□□ -1.53
ACTN4O43707 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ACTN4O43707 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ACTN4O43707 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ACTN4O43707 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 RNU6-137P-201ENST00000363680 108 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 RNU6-1074P-201ENST00000383995 104 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 RNU6-429P-201ENST00000384582 108 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 RNU6-1248P-201ENST00000391096 64 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 AL357134.1-201ENST00000445848 426 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.47□□□□□ -1.53
ACTN4O43707 ANP32BP2-201ENST00000454525 545 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 AL591473.1-201ENST00000464297 313 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 RNA5SP290-201ENST00000517133 127 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.47□□□□□ -1.53
ACTN4O43707 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.47□□□□□ -1.53
ACTN4O43707 MIR3613-201ENST00000579844 87 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 SNORD84-203ENST00000584275 78 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 AC006116.3-201ENST00000592968 361 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 AL138963.2-201ENST00000605137 226 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 AC092628.2-201ENST00000622492 339 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 AC027309.3-201ENST00000623419 351 ntBASIC5.47□□□□□ -1.53
ACTN4O43707 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ACTN4O43707 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.47□□□□□ -1.53
ACTN4O43707 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
ACTN4O43707 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.47□□□□□ -1.53
ACTN4O43707 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.47□□□□□ -1.53
ACTN4O43707 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ACTN4O43707 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ACTN4O43707 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
ACTN4O43707 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.46□□□□□ -1.53
ACTN4O43707 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ACTN4O43707 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.46□□□□□ -1.54
ACTN4O43707 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ACTN4O43707 U8.4-201ENST00000363626 134 ntBASIC5.46□□□□□ -1.54
ACTN4O43707 RNA5SP267-201ENST00000364893 126 ntBASIC5.46□□□□□ -1.54
ACTN4O43707 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.46□□□□□ -1.54
ACTN4O43707 SNORA51.8-201ENST00000384234 132 ntBASIC5.46□□□□□ -1.54
ACTN4O43707 U8.10-201ENST00000384260 133 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms