Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.34□□□□□ -1.87
SMAD6O43541 AL355812.1-201ENST00000603215 216 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AP001330.4-201ENST00000604350 154 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 APOOP1-201ENST00000604695 592 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AC080078.3-201ENST00000605407 463 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AL110115.1-201ENST00000614396 364 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.34□□□□□ -1.87
SMAD6O43541 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.34□□□□□ -1.88
SMAD6O43541 AC244517.1-201ENST00000606030 2086 ntBASIC3.34□□□□□ -1.88
SMAD6O43541 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SMAD6O43541 TAB3P1-202ENST00000452645 1634 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMAD6O43541 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMAD6O43541 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMAD6O43541 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMAD6O43541 RNU6-254P-201ENST00000363377 107 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 U3.12-201ENST00000364498 214 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SMAD6O43541 Y_RNA.414-201ENST00000384011 101 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 Y_RNA.422-201ENST00000384054 114 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNU6-339P-201ENST00000384310 107 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNY4P36-201ENST00000391116 96 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNU2-29P-201ENST00000410423 189 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNU6-1077P-201ENST00000410506 102 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNU6-55P-201ENST00000411092 107 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNU6-954P-201ENST00000411355 107 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNU6-1304P-201ENST00000411374 106 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC245054.2-201ENST00000415639 319 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 BEND7P1-201ENST00000422058 457 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.33□□□□□ -1.88
SMAD6O43541 EZH2P1-201ENST00000431167 291 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
SMAD6O43541 SNRPEP4-201ENST00000435815 279 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 MTND3P2-201ENST00000438452 342 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RPS3AP12-201ENST00000443616 753 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.33□□□□□ -1.88
SMAD6O43541 MTND1P9-201ENST00000453775 944 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AL162395.1-201ENST00000457882 422 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 Y_RNA.635-201ENST00000459041 101 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNU7-66P-201ENST00000459469 62 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC010401.1-201ENST00000463867 348 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC021205.2-201ENST00000480069 347 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RPL7P42-201ENST00000481005 679 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.33□□□□□ -1.88
SMAD6O43541 AL163540.1-201ENST00000485382 386 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC083904.1-201ENST00000487828 231 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RN7SL504P-201ENST00000494496 287 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 MTCO1P29-201ENST00000496868 288 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 COX7A2P2-201ENST00000505291 250 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.33□□□□□ -1.88
SMAD6O43541 RNU6-864P-201ENST00000516256 108 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNU7-51P-201ENST00000516560 62 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RNA5SP503-201ENST00000517047 117 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 SNORA70.24-201ENST00000517233 118 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 RN7SKP57-201ENST00000517248 293 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.33□□□□□ -1.88
SMAD6O43541 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.33□□□□□ -1.88
SMAD6O43541 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.33□□□□□ -1.88
SMAD6O43541 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.33□□□□□ -1.88
SMAD6O43541 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.33□□□□□ -1.88
SMAD6O43541 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.33□□□□□ -1.88
SMAD6O43541 AC011602.1-201ENST00000546484 331 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 HIGD1AP1-201ENST00000550979 275 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.33□□□□□ -1.88
SMAD6O43541 MIR4703-201ENST00000577728 79 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 MIR3942-201ENST00000585264 109 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 BDH2P1-201ENST00000602288 736 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AL022099.1-201ENST00000604551 712 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AL080274.1-201ENST00000605565 220 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC008962.1-201ENST00000605729 304 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC004908.2-201ENST00000609090 574 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMAD6O43541 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AC093838.1-201ENST00000613014 469 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 AL136313.1-201ENST00000624804 202 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMAD6O43541 AC017071.1-201ENST00000564407 2204 ntBASIC3.33□□□□□ -1.88
SMAD6O43541 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMAD6O43541 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SMAD6O43541 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMAD6O43541 SRP72P2-201ENST00000344851 1979 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMAD6O43541 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SMAD6O43541 Y_RNA.144-201ENST00000363521 113 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 Y_RNA.146-201ENST00000363549 102 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 Y_RNA.339-201ENST00000365325 102 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMAD6O43541 AP002088.1-201ENST00000382740 395 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 Y_RNA.530-201ENST00000384587 101 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 RNU6-278P-201ENST00000390945 109 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 RNU2-39P-201ENST00000410604 198 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 OR6C66P-201ENST00000414917 930 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 VN1R36P-201ENST00000414936 291 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.32□□□□□ -1.88
SMAD6O43541 RPL31P12-201ENST00000422587 358 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AC115115.1-201ENST00000449927 248 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.32□□□□□ -1.88
SMAD6O43541 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.32□□□□□ -1.88
SMAD6O43541 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms