Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AP000484.1-201ENST00000620067 1252 ntBASIC2.84□□□□□ -1.95
CUX2O14529 AL356596.1-201ENST00000624230 379 ntBASIC2.84□□□□□ -1.95
CUX2O14529 AC006927.4-201ENST00000639187 543 ntBASIC2.84□□□□□ -1.95
CUX2O14529 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CUX2O14529 SDAD1P2-201ENST00000441308 2028 ntBASIC2.84□□□□□ -1.96
CUX2O14529 SNORA16.1-201ENST00000364597 132 ntBASIC2.84□□□□□ -1.96
CUX2O14529 Y_RNA.458-201ENST00000384240 102 ntBASIC2.84□□□□□ -1.96
CUX2O14529 MIR548J-201ENST00000408833 112 ntBASIC2.84□□□□□ -1.96
CUX2O14529 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.84□□□□□ -1.96
CUX2O14529 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.84□□□□□ -1.96
CUX2O14529 AIG1P1-201ENST00000503376 148 ntBASIC2.84□□□□□ -1.96
CUX2O14529 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.84□□□□□ -1.96
CUX2O14529 AC124947.2-202ENST00000552735 133 ntBASIC2.84□□□□□ -1.96
CUX2O14529 AC007375.1-201ENST00000554513 578 ntBASIC2.84□□□□□ -1.96
CUX2O14529 AL121821.2-201ENST00000556081 394 ntBASIC2.84□□□□□ -1.96
CUX2O14529 AL049838.1-201ENST00000563647 981 ntBASIC2.84□□□□□ -1.96
CUX2O14529 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.84□□□□□ -1.96
CUX2O14529 AC112220.3-201ENST00000605502 502 ntBASIC2.84□□□□□ -1.96
CUX2O14529 AL603758.1-201ENST00000618654 241 ntBASIC2.84□□□□□ -1.96
CUX2O14529 AC079597.1-201ENST00000624306 508 ntBASIC2.84□□□□□ -1.96
CUX2O14529 OR4G3P-201ENST00000633500 913 ntBASIC2.84□□□□□ -1.96
CUX2O14529 PCMTD1P7-201ENST00000634506 357 ntBASIC2.84□□□□□ -1.96
CUX2O14529 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.83□□□□□ -1.96
CUX2O14529 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CUX2O14529 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.83□□□□□ -1.96
CUX2O14529 RNA5SP354-201ENST00000391247 136 ntBASIC2.83□□□□□ -1.96
CUX2O14529 RNU6-757P-201ENST00000410334 100 ntBASIC2.83□□□□□ -1.96
CUX2O14529 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.83□□□□□ -1.96
CUX2O14529 TAAR7P-201ENST00000436141 242 ntBASIC2.83□□□□□ -1.96
CUX2O14529 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.83□□□□□ -1.96
CUX2O14529 CR769776.1-201ENST00000441254 787 ntBASIC2.83□□□□□ -1.96
CUX2O14529 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.83□□□□□ -1.96
CUX2O14529 MTCYBP43-201ENST00000513621 740 ntBASIC2.83□□□□□ -1.96
CUX2O14529 FABP5P5-201ENST00000515537 406 ntBASIC2.83□□□□□ -1.96
CUX2O14529 SCARNA15.2-201ENST00000516409 127 ntBASIC2.83□□□□□ -1.96
CUX2O14529 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.83□□□□□ -1.96
CUX2O14529 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.83□□□□□ -1.96
CUX2O14529 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.83□□□□□ -1.96
CUX2O14529 HMGB1P14-201ENST00000557424 591 ntBASIC2.83□□□□□ -1.96
CUX2O14529 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.83□□□□□ -1.96
CUX2O14529 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.83□□□□□ -1.96
CUX2O14529 FAM106DP-201ENST00000586416 501 ntBASIC2.83□□□□□ -1.96
CUX2O14529 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.83□□□□□ -1.96
CUX2O14529 AC090132.2-201ENST00000615881 347 ntBASIC2.83□□□□□ -1.96
CUX2O14529 MIR6767-201ENST00000637302 66 ntBASIC2.83□□□□□ -1.96
CUX2O14529 ZNF209P-201ENST00000593450 2304 ntBASIC2.83□□□□□ -1.96
CUX2O14529 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CUX2O14529 MTND4P23-201ENST00000447723 1363 ntBASIC2.82□□□□□ -1.96
CUX2O14529 SNORA4.1-201ENST00000364263 144 ntBASIC2.82□□□□□ -1.96
CUX2O14529 RNU6-853P-201ENST00000364306 107 ntBASIC2.82□□□□□ -1.96
CUX2O14529 RNA5SP139-201ENST00000364340 117 ntBASIC2.82□□□□□ -1.96
CUX2O14529 SNORA23-201ENST00000365128 182 ntBASIC2.82□□□□□ -1.96
CUX2O14529 U3.20-201ENST00000390909 217 ntBASIC2.82□□□□□ -1.96
CUX2O14529 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.82□□□□□ -1.96
CUX2O14529 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.82□□□□□ -1.96
CUX2O14529 MTCO1P27-201ENST00000448269 226 ntBASIC2.82□□□□□ -1.96
CUX2O14529 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.82□□□□□ -1.96
CUX2O14529 HMGB1P36-201ENST00000487709 576 ntBASIC2.82□□□□□ -1.96
CUX2O14529 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.82□□□□□ -1.96
CUX2O14529 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.82□□□□□ -1.96
CUX2O14529 RNU6-311P-201ENST00000516224 102 ntBASIC2.82□□□□□ -1.96
CUX2O14529 RNU6-1256P-201ENST00000516539 103 ntBASIC2.82□□□□□ -1.96
CUX2O14529 RNU6-928P-201ENST00000516876 104 ntBASIC2.82□□□□□ -1.96
CUX2O14529 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.82□□□□□ -1.96
CUX2O14529 AL139344.1-201ENST00000605228 195 ntBASIC2.82□□□□□ -1.96
CUX2O14529 AC144521.1-201ENST00000607148 956 ntBASIC2.82□□□□□ -1.96
CUX2O14529 AC093838.1-201ENST00000613014 469 ntBASIC2.82□□□□□ -1.96
CUX2O14529 AC013476.2-201ENST00000614456 459 ntBASIC2.82□□□□□ -1.96
CUX2O14529 AC091895.1-201ENST00000624494 256 ntBASIC2.82□□□□□ -1.96
CUX2O14529 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.82□□□□□ -1.96
CUX2O14529 MTND4P1-201ENST00000457501 1466 ntBASIC2.82□□□□□ -1.96
CUX2O14529 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.81□□□□□ -1.96
CUX2O14529 AL049641.1-201ENST00000441055 1948 ntBASIC2.81□□□□□ -1.96
CUX2O14529 AL138713.1-201ENST00000624026 2130 ntBASIC2.81□□□□□ -1.96
CUX2O14529 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CUX2O14529 RNU6-777P-201ENST00000364265 104 ntBASIC2.81□□□□□ -1.96
CUX2O14529 TAS2R15P-201ENST00000390674 928 ntBASIC2.81□□□□□ -1.96
CUX2O14529 RNU6-278P-201ENST00000390945 109 ntBASIC2.81□□□□□ -1.96
CUX2O14529 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.81□□□□□ -1.96
CUX2O14529 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
CUX2O14529 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.81□□□□□ -1.96
CUX2O14529 AC060771.1-201ENST00000582031 164 ntBASIC2.81□□□□□ -1.96
CUX2O14529 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.81□□□□□ -1.96
CUX2O14529 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.81□□□□□ -1.96
CUX2O14529 AC016727.2-201ENST00000603988 621 ntBASIC2.81□□□□□ -1.96
CUX2O14529 AC092953.2-201ENST00000608000 699 ntBASIC2.81□□□□□ -1.96
CUX2O14529 AC007349.4-201ENST00000608114 532 ntBASIC2.81□□□□□ -1.96
CUX2O14529 AC010133.1-201ENST00000615809 842 ntBASIC2.81□□□□□ -1.96
CUX2O14529 AC068787.1-201ENST00000623908 691 ntBASIC2.81□□□□□ -1.96
CUX2O14529 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.81□□□□□ -1.96
CUX2O14529 OR5H6-203ENST00000642105 978 ntBASIC2.81□□□□□ -1.96
CUX2O14529 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
CUX2O14529 HSPE1P11-201ENST00000339579 310 ntBASIC2.8□□□□□ -1.96
CUX2O14529 RNU6-723P-201ENST00000383973 107 ntBASIC2.8□□□□□ -1.96
CUX2O14529 RNU6-198P-201ENST00000384258 104 ntBASIC2.8□□□□□ -1.96
CUX2O14529 AL590084.2-201ENST00000401481 382 ntBASIC2.8□□□□□ -1.96
CUX2O14529 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.8□□□□□ -1.96
CUX2O14529 UBE2FP1-201ENST00000416536 447 ntBASIC2.8□□□□□ -1.96
CUX2O14529 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.8□□□□□ -1.96
CUX2O14529 ELOCP9-201ENST00000418624 239 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms