Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 SMG1P6-201ENST00000532337 2930 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 RNU6-629P-201ENST00000384061 103 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 RPL12P39-201ENST00000455456 496 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 RNU6-437P-201ENST00000459408 95 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 RPS23P2-201ENST00000463671 415 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 RN7SL860P-201ENST00000473738 223 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 RNU6-521P-201ENST00000516663 105 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 RN7SKP66-201ENST00000516681 231 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 RNU1-117P-201ENST00000517041 158 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 RNU4-60P-201ENST00000517239 135 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 IGKV2D-19-201ENST00000523346 262 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 AC126177.5-201ENST00000549599 178 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 HMGN2P47-201ENST00000559378 272 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 MIR4646-201ENST00000580775 63 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 VN1R85P-201ENST00000601587 426 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 AC000068.2-201ENST00000608816 460 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 MIR6820-201ENST00000611508 62 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 RNA5SP439-201ENST00000617595 124 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 MALAT1.1-201ENST00000618249 95 ntBASIC4.69□□□□□ -1.66
RNF223E7ERA6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF223E7ERA6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF223E7ERA6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 ZNF137P-201ENST00000456718 1920 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 Y_RNA.221-201ENST00000364248 96 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 RNU6-1323P-201ENST00000384025 107 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 MIR590-201ENST00000385008 97 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 EI24P2-201ENST00000397776 1076 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 MIR891A-201ENST00000401237 79 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 AC099548.1-201ENST00000421443 426 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 HMGN2P30-201ENST00000423237 256 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 CALM2P4-201ENST00000430810 426 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 FTLP19-201ENST00000433300 394 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 MTATP8P2-201ENST00000435212 202 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 AC010618.1-201ENST00000469924 477 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 RN7SL447P-201ENST00000494711 245 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 RNA5SP228-201ENST00000516232 133 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 SNORA70.16-201ENST00000516390 95 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 POLR3GP1-201ENST00000594073 261 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 FTX_3.1-201ENST00000610451 147 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 TCL6_2.1-201ENST00000615162 119 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 AL590808.1-201ENST00000618696 141 ntBASIC4.68□□□□□ -1.66
RNF223E7ERA6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF223E7ERA6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF223E7ERA6 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 AL589743.1-201ENST00000551932 2712 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms