Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AC241584.1-201ENST00000438469 1241 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AC139453.3-201ENST00000493276 369 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.62□□□□□ -2.31
CNOT1A5YKK6 CYP4A27P-201ENST00000567218 190 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AC103710.4-201ENST00000609301 899 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AC068787.1-201ENST00000623908 691 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AL158823.1-201ENST00000418441 478 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AC083875.1-201ENST00000419509 405 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.61□□□□□ -2.31
CNOT1A5YKK6 OR2A41P-201ENST00000473586 105 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 OR52A4P-202ENST00000481634 799 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AC016065.2-201ENST00000514530 444 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 SNORA44.1-201ENST00000517031 108 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.61□□□□□ -2.31
CNOT1A5YKK6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AC068620.3-201ENST00000602749 560 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 ELOCP5-201ENST00000604924 333 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AL034418.1-201ENST00000448675 860 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CNOT1A5YKK6 IGLVI-20-201ENST00000519296 130 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AC009974.1-201ENST00000608881 455 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 RMST_5.1-201ENST00000618704 126 ntBASIC0.61□□□□□ -2.31
CNOT1A5YKK6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.61□□□□□ -2.31
CNOT1A5YKK6 AC010329.5-201ENST00000623497 2174 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 ZNF29P-201ENST00000225587 168 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 RNA5SP299-201ENST00000391203 116 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 OR8K4P-201ENST00000534608 872 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 LINC00557-201ENST00000563184 1279 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 RNU6-1083P-201ENST00000384022 107 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 AL356421.1-201ENST00000403255 413 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 RPL30P5-201ENST00000494923 336 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 PRR13P7-201ENST00000605538 430 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 AC018638.7-201ENST00000605836 1114 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 AC099842.1-201ENST00000619919 596 ntBASIC0.6□□□□□ -2.31
CNOT1A5YKK6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
CNOT1A5YKK6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 AC107953.1-201ENST00000522216 297 ntBASIC0.59□□□□□ -2.31
CNOT1A5YKK6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.59□□□□□ -2.31
CNOT1A5YKK6 AC243960.4-201ENST00000600532 288 ntBASIC0.59□□□□□ -2.31
CNOT1A5YKK6 AL355877.2-201ENST00000603670 358 ntBASIC0.59□□□□□ -2.31
CNOT1A5YKK6 AP003400.5-201ENST00000624827 617 ntBASIC0.59□□□□□ -2.31
CNOT1A5YKK6 TPTE2P4-201ENST00000258589 1605 ntBASIC0.59□□□□□ -2.32
CNOT1A5YKK6 SNORD65-201ENST00000391079 73 ntBASIC0.59□□□□□ -2.32
CNOT1A5YKK6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.59□□□□□ -2.32
CNOT1A5YKK6 MTND6P13-201ENST00000443510 523 ntBASIC0.59□□□□□ -2.32
CNOT1A5YKK6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.59□□□□□ -2.32
CNOT1A5YKK6 AL359385.1-201ENST00000456509 365 ntBASIC0.59□□□□□ -2.32
CNOT1A5YKK6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.59□□□□□ -2.32
CNOT1A5YKK6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
CNOT1A5YKK6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.59□□□□□ -2.32
CNOT1A5YKK6 MIR6718-201ENST00000616153 80 ntBASIC0.59□□□□□ -2.32
CNOT1A5YKK6 AC073569.3-201ENST00000619055 682 ntBASIC0.59□□□□□ -2.32
CNOT1A5YKK6 RNU6-1305P-201ENST00000364353 104 ntBASIC0.58□□□□□ -2.32
CNOT1A5YKK6 Y_RNA.493-201ENST00000384422 102 ntBASIC0.58□□□□□ -2.32
CNOT1A5YKK6 MTCO3P4-201ENST00000419236 787 ntBASIC0.58□□□□□ -2.32
CNOT1A5YKK6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.58□□□□□ -2.32
CNOT1A5YKK6 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CNOT1A5YKK6 AL354941.1-201ENST00000438600 464 ntBASIC0.58□□□□□ -2.32
CNOT1A5YKK6 RPL39P29-201ENST00000447779 157 ntBASIC0.58□□□□□ -2.32
CNOT1A5YKK6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.58□□□□□ -2.32
CNOT1A5YKK6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.58□□□□□ -2.32
CNOT1A5YKK6 AC240442.1-201ENST00000616055 283 ntBASIC0.58□□□□□ -2.32
CNOT1A5YKK6 RNU6-1328P-201ENST00000410938 106 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 SFR1P2-201ENST00000421841 730 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 MTCO1P53-201ENST00000441633 699 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AC005908.1-201ENST00000468701 347 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AF213884.2-201ENST00000510417 903 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 MTRNR2L2-201ENST00000604882 87 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AL021997.1-201ENST00000605757 193 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms