Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC113347.3-201ENST00000509113 148 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC117522.2-201ENST00000510049 657 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC093281.2-201ENST00000510153 597 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC024589.1-201ENST00000512207 263 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-390P-201ENST00000516259 103 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-250P-201ENST00000516958 103 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC068620.3-201ENST00000602749 560 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC025811.1-201ENST00000604312 472 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 MIR8081-201ENST00000611533 95 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC012150.2-201ENST00000621300 544 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-748P-201ENST00000384648 107 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 SNORA40.19-201ENST00000390846 128 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 RNA5SP450-201ENST00000411206 102 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AL449283.1-202ENST00000418249 604 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 USP9YP11-201ENST00000427537 717 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC005410.1-202ENST00000460347 485 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC087884.1-201ENST00000469738 328 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC117503.1-201ENST00000472241 394 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 RPL22P13-201ENST00000493291 347 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 SMURF2P1-201ENST00000514992 481 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-703P-201ENST00000516946 107 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AL133153.1-201ENST00000557756 303 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC104581.2-201ENST00000572227 430 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 MIR3167-201ENST00000579623 85 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC060771.1-201ENST00000582031 164 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC090186.1-201ENST00000605991 572 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 DUSP12P1-201ENST00000612874 516 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 MIR5739-201ENST00000619803 80 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 MIR7843-201ENST00000622274 79 ntBASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV41A0A0B4J266 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
TRAV41A0A0B4J266 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
TRAV41A0A0B4J266 ADAM3A-203ENST00000461344 2157 ntBASIC1.34□□□□□ -2.2
TRAV41A0A0B4J266 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
TRAV41A0A0B4J266 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL390862.1-201ENST00000635467 1469 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-223P-201ENST00000362830 107 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-621P-201ENST00000364752 109 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-658P-201ENST00000384606 106 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-298P-201ENST00000390888 96 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL627390.1-201ENST00000396055 340 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 MIR1284-201ENST00000408337 120 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 RNU2-68P-201ENST00000410878 191 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC069282.1-201ENST00000411911 526 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 SNORD56-201ENST00000413522 71 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 RPL21P24-201ENST00000413752 448 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC244636.1-201ENST00000421152 228 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 ISCA1P1-201ENST00000426679 387 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 RPL36AP53-201ENST00000432891 316 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 NANOGP2-201ENST00000435391 727 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AP000542.1-201ENST00000448473 371 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 CYP2C59P-201ENST00000457790 269 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC110760.3-202ENST00000515177 371 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 SNORA25.11-201ENST00000515935 105 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 SNORA31.23-201ENST00000517219 133 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC107953.1-201ENST00000522216 297 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC092451.2-201ENST00000538746 658 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL121821.2-201ENST00000556081 394 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 DEFB122-202ENST00000569013 197 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC022202.1-201ENST00000613515 211 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL109620.1-201ENST00000618738 1197 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 OR1S1-201ENST00000624470 978 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC241585.2-209ENST00000638217 143 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 AC009487.4-201ENST00000624969 3585 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 DDX43P2-201ENST00000604753 1354 ntBASIC1.33□□□□□ -2.2
TRAV41A0A0B4J266 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-853P-201ENST00000364306 107 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-512P-201ENST00000364438 103 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 U3.13-201ENST00000364804 214 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AL359634.1-202ENST00000404721 284 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms