Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 SNORA25B-201ENST00000365507 128 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-482P-201ENST00000391068 107 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU2-42P-201ENST00000410697 113 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC068533.2-201ENST00000411872 306 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AL160275.3-201ENST00000423876 471 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AL591806.2-201ENST00000433122 173 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AP000949.1-201ENST00000438328 629 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AL161788.1-201ENST00000441805 169 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 MTCO3P45-201ENST00000443036 613 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 MTND5P13-201ENST00000513046 1079 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC027338.1-201ENST00000514840 825 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-250P-201ENST00000516958 103 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AL121821.2-201ENST00000556081 394 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC022254.1-201ENST00000567857 235 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 MTCYBP22-201ENST00000603788 447 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 BX248123.2-201ENST00000606318 124 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR502-201ENST00000606349 86 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC138627.2-201ENST00000624202 601 ntBASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 ZNF72P-201ENST00000425869 1908 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 NACAP2-201ENST00000318548 624 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR517C-201ENST00000385103 95 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR561-201ENST00000385216 97 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 RNA5SP212-201ENST00000391223 107 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR1289-2-201ENST00000408360 111 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL353621.1-201ENST00000418219 243 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL358453.1-201ENST00000422522 250 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 RSU1P2-202ENST00000437884 485 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL121601.2-201ENST00000438019 707 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 MTND2P29-201ENST00000438595 412 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 MTND6P13-201ENST00000443510 523 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 MTATP6P30-201ENST00000443540 664 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC098862.1-201ENST00000504991 413 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-1225P-201ENST00000516336 65 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 SNORA48.11-201ENST00000517015 89 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC034114.1-201ENST00000520293 285 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 NDUFA5P6-201ENST00000542110 379 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 OR6C7P-201ENST00000547875 934 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC012213.3-201ENST00000577199 777 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AF038458.1-201ENST00000588406 262 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL445435.1-201ENST00000604232 665 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC078880.5-201ENST00000617845 421 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL353997.5-201ENST00000618886 171 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL118508.4-201ENST00000624142 1176 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AP005901.5-201ENST00000545779 1796 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AL079343.1-201ENST00000572358 1771 ntBASIC1.13□□□□□ -2.23
TRAV1-1A0A0B4J248 AC006026.1-201ENST00000444025 1803 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AL356292.1-201ENST00000283110 373 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 SNORA40.18-201ENST00000391200 128 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC127391.1-201ENST00000411737 98 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC244035.1-201ENST00000430042 390 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 MTND5P14-201ENST00000441481 1267 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 RPL36AP48-201ENST00000485521 314 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 RPS15AP36-201ENST00000492022 382 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 SNORA4.4-201ENST00000515921 135 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-237P-201ENST00000515985 71 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 SNORA25.15-201ENST00000516487 89 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC015712.3-201ENST00000559380 164 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC008269.2-201ENST00000561915 1105 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms