Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 AC008622.2-201ENST00000617006 1229 ntBASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 KRT126P-201ENST00000549467 1181 ntBASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 IER3-202ENST00000376377 1350 ntBASIC17.79■□□□□ 0.44
PCDHGA9Q9Y5G4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 AP000523.1-201ENST00000398242 1049 ntBASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 CKBP1-201ENST00000565489 1086 ntBASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA9Q9Y5G4 AC125437.2-201ENST00000625180 2167 ntBASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 AL671277.2-201ENST00000458060 996 ntBASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 BX119927.1-201ENST00000636596 1552 ntBASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PCDHGA9Q9Y5G4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA9Q9Y5G4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA9Q9Y5G4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA9Q9Y5G4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA9Q9Y5G4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA9Q9Y5G4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHGA9Q9Y5G4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA9Q9Y5G4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA9Q9Y5G4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms