Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 FAM207BP-201ENST00000447172 505 ntBASIC19.11■□□□□ 0.65
PKP3Q9Y446 AC011506.1-201ENST00000474329 610 ntBASIC19.11■□□□□ 0.65
PKP3Q9Y446 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 FP475955.4-201ENST00000623131 1990 ntBASIC19.1■□□□□ 0.65
PKP3Q9Y446 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 TSPY7P-201ENST00000431358 1114 ntBASIC19.1■□□□□ 0.65
PKP3Q9Y446 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 AC116562.2-201ENST00000507042 360 ntBASIC19.1■□□□□ 0.65
PKP3Q9Y446 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 PRSS44-201ENST00000515154 1146 ntBASIC19.1■□□□□ 0.65
PKP3Q9Y446 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP3Q9Y446 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.1■□□□□ 0.65
PKP3Q9Y446 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 IRX1P1-201ENST00000438849 1838 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 FEM1AP3-201ENST00000403722 1741 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 KRT17P2-201ENST00000300992 1314 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 SNORA78-201ENST00000459373 127 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 AC093827.2-201ENST00000512654 315 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 AP003071.4-201ENST00000562276 1284 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 AC066615.1-201ENST00000640911 628 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 AC087289.5-201ENST00000586076 3175 ntBASIC19.09■□□□□ 0.65
PKP3Q9Y446 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.09■□□□□ 0.65
PKP3Q9Y446 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP3Q9Y446 KRT8P11-201ENST00000409686 1436 ntBASIC19.08■□□□□ 0.65
PKP3Q9Y446 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PKP3Q9Y446 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.08■□□□□ 0.65
PKP3Q9Y446 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PKP3Q9Y446 AL161938.1-201ENST00000569833 2180 ntBASIC19.08■□□□□ 0.65
PKP3Q9Y446 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PKP3Q9Y446 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PKP3Q9Y446 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.08■□□□□ 0.64
PKP3Q9Y446 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PKP3Q9Y446 MESTP1-201ENST00000404287 994 ntBASIC19.08■□□□□ 0.64
PKP3Q9Y446 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PKP3Q9Y446 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.08■□□□□ 0.64
PKP3Q9Y446 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PKP3Q9Y446 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.08■□□□□ 0.64
PKP3Q9Y446 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKP3Q9Y446 DGCR10-201ENST00000609839 495 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms