Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 AC066615.1-201ENST00000640911 628 ntBASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
BLOC1S4Q9NUP1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
BLOC1S4Q9NUP1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 AL020996.1-203ENST00000536896 2307 ntBASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 AC079598.2-202ENST00000546624 1451 ntBASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 KRT8P3-201ENST00000519669 1449 ntBASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 RBM17P1-201ENST00000453646 1190 ntBASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 TSPY15P-201ENST00000457163 923 ntBASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 AC097488.1-201ENST00000507834 756 ntBASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 MIR4497-201ENST00000583208 89 ntBASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 MIR4785-201ENST00000585005 73 ntBASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BLOC1S4Q9NUP1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 AC093525.10-201ENST00000625130 1569 ntBASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 MFAP1P1-201ENST00000442257 1255 ntBASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 AL355075.4-201ENST00000554988 638 ntBASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 SLC25A1P4-201ENST00000567977 778 ntBASIC21.15■□□□□ 0.98
BLOC1S4Q9NUP1 AC083906.6-201ENST00000641366 219 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms