Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSTQ99698 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSTQ99698 MIR1233-2-201ENST00000408138 82 ntBASIC13.18□□□□□ -0.3
LYSTQ99698 MIR1233-1-201ENST00000408722 82 ntBASIC13.18□□□□□ -0.3
LYSTQ99698 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSTQ99698 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.18□□□□□ -0.3
LYSTQ99698 AC027796.2-201ENST00000575326 344 ntBASIC13.18□□□□□ -0.3
LYSTQ99698 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.18□□□□□ -0.3
LYSTQ99698 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSTQ99698 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
LYSTQ99698 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSTQ99698 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
LYSTQ99698 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSTQ99698 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.18□□□□□ -0.3
LYSTQ99698 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSTQ99698 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
LYSTQ99698 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSTQ99698 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.18□□□□□ -0.3
LYSTQ99698 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LYSTQ99698 AL590627.1-203ENST00000421194 1026 ntBASIC13.18□□□□□ -0.3
LYSTQ99698 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.18□□□□□ -0.3
LYSTQ99698 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.18□□□□□ -0.3
LYSTQ99698 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSTQ99698 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LYSTQ99698 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
LYSTQ99698 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSTQ99698 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.18□□□□□ -0.3
LYSTQ99698 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSTQ99698 TSPY22P-201ENST00000427496 604 ntBASIC13.18□□□□□ -0.3
LYSTQ99698 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.18□□□□□ -0.3
LYSTQ99698 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.18□□□□□ -0.3
LYSTQ99698 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSTQ99698 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSTQ99698 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LYSTQ99698 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.17□□□□□ -0.3
LYSTQ99698 AC036111.1-201ENST00000533973 1582 ntBASIC13.17□□□□□ -0.3
LYSTQ99698 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LYSTQ99698 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.17□□□□□ -0.3
LYSTQ99698 AL773604.1-201ENST00000617417 272 ntBASIC13.17□□□□□ -0.3
LYSTQ99698 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.17□□□□□ -0.3
LYSTQ99698 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.17□□□□□ -0.3
LYSTQ99698 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.17□□□□□ -0.3
LYSTQ99698 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.17□□□□□ -0.3
LYSTQ99698 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.17□□□□□ -0.3
LYSTQ99698 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.17□□□□□ -0.3
LYSTQ99698 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.17□□□□□ -0.3
LYSTQ99698 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYSTQ99698 AP001160.2-201ENST00000596071 487 ntBASIC13.17□□□□□ -0.3
LYSTQ99698 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.17□□□□□ -0.3
LYSTQ99698 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LYSTQ99698 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LYSTQ99698 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.16□□□□□ -0.3
LYSTQ99698 LINC00265-3P-201ENST00000447588 903 ntBASIC13.16□□□□□ -0.3
LYSTQ99698 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSTQ99698 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSTQ99698 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.16□□□□□ -0.3
LYSTQ99698 AL353801.3-201ENST00000609898 542 ntBASIC13.16□□□□□ -0.3
LYSTQ99698 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSTQ99698 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 AC104417.2-201ENST00000562989 1793 ntBASIC13.16□□□□□ -0.3
LYSTQ99698 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSTQ99698 LINC01006-201ENST00000333319 2292 ntBASIC13.16□□□□□ -0.3
LYSTQ99698 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
LYSTQ99698 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.16□□□□□ -0.3
LYSTQ99698 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSTQ99698 POLD2P1-201ENST00000511220 997 ntBASIC13.16□□□□□ -0.3
LYSTQ99698 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LYSTQ99698 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSTQ99698 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSTQ99698 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LYSTQ99698 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSTQ99698 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.16□□□□□ -0.3
LYSTQ99698 AL121672.3-201ENST00000608644 468 ntBASIC13.16□□□□□ -0.3
LYSTQ99698 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms