Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF11Q99590 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF11Q99590 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF11Q99590 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
SCAF11Q99590 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF11Q99590 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF11Q99590 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SCAF11Q99590 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
SCAF11Q99590 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC27.33■■□□□ 1.97
SCAF11Q99590 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF11Q99590 SPEG-225ENST00000617028 815 ntTSL 5 BASIC27.33■■□□□ 1.97
SCAF11Q99590 USP48-205ENST00000421625 2818 ntTSL 2 BASIC27.33■■□□□ 1.97
SCAF11Q99590 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF11Q99590 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF11Q99590 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF11Q99590 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF11Q99590 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SCAF11Q99590 AC036111.1-201ENST00000533973 1582 ntBASIC27.33■■□□□ 1.96
SCAF11Q99590 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
SCAF11Q99590 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SCAF11Q99590 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC27.32■■□□□ 1.96
SCAF11Q99590 AL121772.3-201ENST00000610840 674 ntBASIC27.32■■□□□ 1.96
SCAF11Q99590 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC27.32■■□□□ 1.96
SCAF11Q99590 LINC01521-201ENST00000504184 1943 ntBASIC27.32■■□□□ 1.96
SCAF11Q99590 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC27.32■■□□□ 1.96
SCAF11Q99590 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SCAF11Q99590 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC27.32■■□□□ 1.96
SCAF11Q99590 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC27.32■■□□□ 1.96
SCAF11Q99590 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC27.32■■□□□ 1.96
SCAF11Q99590 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 MRPL3P1-201ENST00000400109 1033 ntBASIC27.32■■□□□ 1.96
SCAF11Q99590 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC27.32■■□□□ 1.96
SCAF11Q99590 KRT18P31-201ENST00000506277 1292 ntBASIC27.32■■□□□ 1.96
SCAF11Q99590 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC27.32■■□□□ 1.96
SCAF11Q99590 PNN-202ENST00000553331 656 ntTSL 3 BASIC27.32■■□□□ 1.96
SCAF11Q99590 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF11Q99590 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SCAF11Q99590 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
SCAF11Q99590 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF11Q99590 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF11Q99590 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
SCAF11Q99590 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SCAF11Q99590 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SCAF11Q99590 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF11Q99590 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF11Q99590 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF11Q99590 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
SCAF11Q99590 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF11Q99590 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF11Q99590 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF11Q99590 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
SCAF11Q99590 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF11Q99590 LINC00265-3P-201ENST00000447588 903 ntBASIC27.31■■□□□ 1.96
SCAF11Q99590 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC27.31■■□□□ 1.96
SCAF11Q99590 AL662844.1-201ENST00000546340 181 ntBASIC27.31■■□□□ 1.96
SCAF11Q99590 AC024243.1-201ENST00000609234 778 ntBASIC27.31■■□□□ 1.96
SCAF11Q99590 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC27.31■■□□□ 1.96
SCAF11Q99590 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF11Q99590 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF11Q99590 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF11Q99590 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF11Q99590 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF11Q99590 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC27.3■■□□□ 1.96
SCAF11Q99590 AC091304.2-201ENST00000564639 760 ntBASIC27.3■■□□□ 1.96
SCAF11Q99590 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC27.3■■□□□ 1.96
SCAF11Q99590 AC120114.3-201ENST00000611923 658 ntBASIC27.3■■□□□ 1.96
SCAF11Q99590 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF11Q99590 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
SCAF11Q99590 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF11Q99590 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF11Q99590 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC27.29■■□□□ 1.96
SCAF11Q99590 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC27.29■■□□□ 1.96
SCAF11Q99590 SEC1P-202ENST00000473944 940 ntBASIC27.29■■□□□ 1.96
SCAF11Q99590 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
SCAF11Q99590 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF11Q99590 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC27.29■■□□□ 1.96
SCAF11Q99590 AC139530.3-201ENST00000620344 690 ntBASIC27.29■■□□□ 1.96
SCAF11Q99590 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF11Q99590 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF11Q99590 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
SCAF11Q99590 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC27.29■■□□□ 1.96
SCAF11Q99590 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC27.29■■□□□ 1.96
SCAF11Q99590 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF11Q99590 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC27.29■■□□□ 1.96
SCAF11Q99590 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC27.29■■□□□ 1.96
SCAF11Q99590 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC27.28■■□□□ 1.96
SCAF11Q99590 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF11Q99590 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF11Q99590 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF11Q99590 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
SCAF11Q99590 TOB2P1-201ENST00000469761 992 ntBASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms