Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 AL049812.1-201ENST00000432563 2267 ntBASIC17.98■□□□□ 0.47
COL21A1Q96P44 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL21A1Q96P44 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL21A1Q96P44 KRT8P8-201ENST00000434750 1448 ntBASIC17.98■□□□□ 0.47
COL21A1Q96P44 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
COL21A1Q96P44 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL21A1Q96P44 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL21A1Q96P44 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL21A1Q96P44 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COL21A1Q96P44 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
COL21A1Q96P44 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.96■□□□□ 0.46
COL21A1Q96P44 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.95■□□□□ 0.46
COL21A1Q96P44 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms