Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 MCRIP2P1-201ENST00000394346 511 ntBASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 AL162412.1-201ENST00000567129 965 ntBASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 AL139384.1-201ENST00000612143 3047 ntBASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM2Q96JY6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 MIR939-201ENST00000401314 82 ntBASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 AC100791.3-201ENST00000617619 330 ntBASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 AC022211.2-201ENST00000585075 2527 ntBASIC21.05■□□□□ 0.96
PDLIM2Q96JY6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM2Q96JY6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 AL499627.1-201ENST00000569373 2188 ntBASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PDLIM2Q96JY6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM2Q96JY6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms