Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 C1QL1P1-201ENST00000568105 661 ntBASIC19.61■□□□□ 0.73
IFT43Q96FT9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.61■□□□□ 0.73
IFT43Q96FT9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.61■□□□□ 0.73
IFT43Q96FT9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
IFT43Q96FT9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
IFT43Q96FT9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 AC120498.9-201ENST00000339021 3867 ntBASIC19.6■□□□□ 0.73
IFT43Q96FT9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 AL355355.2-201ENST00000442321 338 ntBASIC19.6■□□□□ 0.73
IFT43Q96FT9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 AL355075.4-201ENST00000554988 638 ntBASIC19.6■□□□□ 0.73
IFT43Q96FT9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 CD177P1-201ENST00000606252 935 ntBASIC19.6■□□□□ 0.73
IFT43Q96FT9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
IFT43Q96FT9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT43Q96FT9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 AP003071.4-201ENST00000562276 1284 ntBASIC19.59■□□□□ 0.73
IFT43Q96FT9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
IFT43Q96FT9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT43Q96FT9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
IFT43Q96FT9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
IFT43Q96FT9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
IFT43Q96FT9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
IFT43Q96FT9 Z82202.1-201ENST00000623446 1880 ntBASIC19.58■□□□□ 0.73
IFT43Q96FT9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IFT43Q96FT9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IFT43Q96FT9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT43Q96FT9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT43Q96FT9 AC087499.1-201ENST00000418141 1075 ntBASIC19.58■□□□□ 0.72
IFT43Q96FT9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.58■□□□□ 0.72
IFT43Q96FT9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.58■□□□□ 0.72
IFT43Q96FT9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.58■□□□□ 0.72
IFT43Q96FT9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.58■□□□□ 0.72
IFT43Q96FT9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.58■□□□□ 0.72
IFT43Q96FT9 AC097493.4-201ENST00000641197 219 ntBASIC19.58■□□□□ 0.72
IFT43Q96FT9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT43Q96FT9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT43Q96FT9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT43Q96FT9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT43Q96FT9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.58■□□□□ 0.72
IFT43Q96FT9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms