Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC026310.3-201ENST00000625186 2373 ntBASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 IL9RP2-201ENST00000423948 1312 ntBASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 IGHV3-41-201ENST00000613121 348 ntBASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM43Q96BQ3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 SLC25A1P1-201ENST00000528351 927 ntBASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM43Q96BQ3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 IGHV3-47-201ENST00000425060 335 ntBASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 AF238378.1-201ENST00000526806 358 ntBASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 AL390719.2-201ENST00000606993 987 ntBASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 TP73-AS1-207ENST00000624167 988 ntBASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM43Q96BQ3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM43Q96BQ3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.64■□□□□ 0.9
TRIM43Q96BQ3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM43Q96BQ3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM43Q96BQ3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
TRIM43Q96BQ3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM43Q96BQ3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 SAPCD2P3-201ENST00000455031 850 ntBASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 REXO1L6P-202ENST00000619970 1078 ntBASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM43Q96BQ3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms