Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 RPS8P6-201ENST00000426177 609 ntBASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 HNRNPDP1-201ENST00000439535 754 ntBASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 AL157888.1-201ENST00000631930 593 ntBASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 NSUN5P1-202ENST00000421140 1535 ntBASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 NSUN5P2-203ENST00000457352 1529 ntBASIC19.91■□□□□ 0.78
PRUNE2Q8WUY3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRUNE2Q8WUY3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 FAM197Y3-203ENST00000618346 717 ntBASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRUNE2Q8WUY3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 AC116407.3-201ENST00000623905 1129 ntBASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRUNE2Q8WUY3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 YBX2P1-201ENST00000394192 760 ntBASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
PRUNE2Q8WUY3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRUNE2Q8WUY3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
PRUNE2Q8WUY3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRUNE2Q8WUY3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRUNE2Q8WUY3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms