Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 POM121L3P-201ENST00000419331 1163 ntBASIC17.18■□□□□ 0.34
CHD6Q8TD26 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 UNC93B6-202ENST00000528242 690 ntBASIC17.18■□□□□ 0.34
CHD6Q8TD26 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.18■□□□□ 0.34
CHD6Q8TD26 C20orf181-201ENST00000623918 480 ntBASIC17.18■□□□□ 0.34
CHD6Q8TD26 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD6Q8TD26 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 GPAT2P1-201ENST00000444924 1672 ntBASIC17.17■□□□□ 0.34
CHD6Q8TD26 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 SLC25A6P5-201ENST00000435663 894 ntBASIC17.17■□□□□ 0.34
CHD6Q8TD26 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.17■□□□□ 0.34
CHD6Q8TD26 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD6Q8TD26 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHD6Q8TD26 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHD6Q8TD26 AP002414.1-201ENST00000391405 1147 ntBASIC17.16■□□□□ 0.34
CHD6Q8TD26 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHD6Q8TD26 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHD6Q8TD26 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD6Q8TD26 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.16■□□□□ 0.34
CHD6Q8TD26 AC114341.1-201ENST00000618070 349 ntBASIC17.16■□□□□ 0.34
CHD6Q8TD26 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD6Q8TD26 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHD6Q8TD26 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.16■□□□□ 0.34
CHD6Q8TD26 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHD6Q8TD26 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.16■□□□□ 0.34
CHD6Q8TD26 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CHD6Q8TD26 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.16■□□□□ 0.34
CHD6Q8TD26 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.16■□□□□ 0.34
CHD6Q8TD26 AC124864.1-201ENST00000623408 392 ntBASIC17.16■□□□□ 0.34
CHD6Q8TD26 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD6Q8TD26 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD6Q8TD26 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 AL162377.1-201ENST00000618844 1793 ntBASIC17.15■□□□□ 0.34
CHD6Q8TD26 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 HEIH-201ENST00000623091 1652 ntBASIC17.15■□□□□ 0.34
CHD6Q8TD26 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 AC096582.2-201ENST00000510860 516 ntBASIC17.15■□□□□ 0.34
CHD6Q8TD26 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD6Q8TD26 AC002310.6-201ENST00000624451 1377 ntBASIC17.15■□□□□ 0.34
CHD6Q8TD26 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHD6Q8TD26 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CHD6Q8TD26 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 RN7SL204P-201ENST00000582831 262 ntBASIC17.14■□□□□ 0.33
CHD6Q8TD26 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms