Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.81□□□□□ -0.04
LINC01006Q8NI28 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.81□□□□□ -0.04
LINC01006Q8NI28 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 BX276092.5-203ENST00000456199 560 ntBASIC14.8□□□□□ -0.04
LINC01006Q8NI28 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 AC011498.5-201ENST00000592027 486 ntBASIC14.8□□□□□ -0.04
LINC01006Q8NI28 AC092329.2-201ENST00000598402 547 ntBASIC14.8□□□□□ -0.04
LINC01006Q8NI28 AL121672.3-201ENST00000608644 468 ntBASIC14.8□□□□□ -0.04
LINC01006Q8NI28 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01006Q8NI28 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 TSSC2-201ENST00000450217 709 ntBASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 KRT8P3-201ENST00000519669 1449 ntBASIC14.79□□□□□ -0.04
LINC01006Q8NI28 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 MIR3652-201ENST00000579335 131 ntBASIC14.79□□□□□ -0.04
LINC01006Q8NI28 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01006Q8NI28 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms