Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 PRSS44-201ENST00000515154 1146 ntBASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF2Q8N5M1 AP000974.1-201ENST00000623909 2387 ntBASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 MESTP1-201ENST00000404287 994 ntBASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 AC008040.2-201ENST00000461049 708 ntBASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 AC130371.2-201ENST00000619443 611 ntBASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF2Q8N5M1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATPAF2Q8N5M1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATPAF2Q8N5M1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
ATPAF2Q8N5M1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATPAF2Q8N5M1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ATPAF2Q8N5M1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATPAF2Q8N5M1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATPAF2Q8N5M1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 AC087289.5-201ENST00000586076 3175 ntBASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 TSPY7P-201ENST00000431358 1114 ntBASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 AC116562.2-201ENST00000507042 360 ntBASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 MIR4785-201ENST00000585005 73 ntBASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 BX323043.1-201ENST00000641006 1765 ntBASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.51■□□□□ 0.71
ATPAF2Q8N5M1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 SNORA78-201ENST00000459373 127 ntBASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 DGCR10-201ENST00000609839 495 ntBASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 REXO1L10P-201ENST00000615707 1290 ntBASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 REXO1L12P-201ENST00000622156 912 ntBASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF2Q8N5M1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms