Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.8■□□□□ 0.76
SCML4Q8N228 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.8■□□□□ 0.76
SCML4Q8N228 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.8■□□□□ 0.76
SCML4Q8N228 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.8■□□□□ 0.76
SCML4Q8N228 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
SCML4Q8N228 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.8■□□□□ 0.76
SCML4Q8N228 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.8■□□□□ 0.76
SCML4Q8N228 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCML4Q8N228 KRT8P32-201ENST00000512863 1461 ntBASIC19.79■□□□□ 0.76
SCML4Q8N228 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.79■□□□□ 0.76
SCML4Q8N228 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCML4Q8N228 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCML4Q8N228 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCML4Q8N228 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.79■□□□□ 0.76
SCML4Q8N228 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCML4Q8N228 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.79■□□□□ 0.76
SCML4Q8N228 AC113347.1-201ENST00000413321 391 ntBASIC19.79■□□□□ 0.76
SCML4Q8N228 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCML4Q8N228 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.79■□□□□ 0.76
SCML4Q8N228 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.79■□□□□ 0.76
SCML4Q8N228 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.79■□□□□ 0.76
SCML4Q8N228 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.79■□□□□ 0.76
SCML4Q8N228 AL512604.3-201ENST00000569583 964 ntBASIC19.79■□□□□ 0.76
SCML4Q8N228 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.79■□□□□ 0.76
SCML4Q8N228 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SCML4Q8N228 AC005363.2-201ENST00000618631 242 ntBASIC19.79■□□□□ 0.76
SCML4Q8N228 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.79■□□□□ 0.76
SCML4Q8N228 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCML4Q8N228 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
SCML4Q8N228 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.79■□□□□ 0.76
SCML4Q8N228 AL512353.2-201ENST00000448759 1962 ntBASIC19.79■□□□□ 0.76
SCML4Q8N228 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCML4Q8N228 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
SCML4Q8N228 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCML4Q8N228 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCML4Q8N228 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.78■□□□□ 0.76
SCML4Q8N228 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 MIR4674-201ENST00000582457 87 ntBASIC19.78■□□□□ 0.76
SCML4Q8N228 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
SCML4Q8N228 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCML4Q8N228 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCML4Q8N228 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.78■□□□□ 0.76
SCML4Q8N228 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.77■□□□□ 0.76
SCML4Q8N228 AC073508.3-201ENST00000619697 1419 ntBASIC19.77■□□□□ 0.76
SCML4Q8N228 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SCML4Q8N228 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCML4Q8N228 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 AL023284.2-201ENST00000405850 579 ntBASIC19.77■□□□□ 0.76
SCML4Q8N228 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.77■□□□□ 0.76
SCML4Q8N228 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.77■□□□□ 0.76
SCML4Q8N228 WWOX-216ENST00000569818 525 ntBASIC19.77■□□□□ 0.76
SCML4Q8N228 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.77■□□□□ 0.76
SCML4Q8N228 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCML4Q8N228 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.77■□□□□ 0.76
SCML4Q8N228 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.77■□□□□ 0.75
SCML4Q8N228 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCML4Q8N228 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCML4Q8N228 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SCML4Q8N228 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SCML4Q8N228 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SCML4Q8N228 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCML4Q8N228 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SCML4Q8N228 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SCML4Q8N228 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCML4Q8N228 AL109659.2-201ENST00000606809 1674 ntBASIC19.76■□□□□ 0.75
SCML4Q8N228 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SCML4Q8N228 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCML4Q8N228 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCML4Q8N228 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.76■□□□□ 0.75
SCML4Q8N228 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCML4Q8N228 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms