Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL23A1Q86Y22 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 KRT18P58-201ENST00000527480 1120 ntBASIC23.9■■□□□ 1.42
COL23A1Q86Y22 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 Z69720.1-201ENST00000601483 472 ntBASIC23.9■■□□□ 1.42
COL23A1Q86Y22 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 AP005212.1-201ENST00000581547 1997 ntBASIC23.9■■□□□ 1.42
COL23A1Q86Y22 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL23A1Q86Y22 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.89■■□□□ 1.42
COL23A1Q86Y22 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.89■■□□□ 1.42
COL23A1Q86Y22 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL23A1Q86Y22 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.89■■□□□ 1.42
COL23A1Q86Y22 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL23A1Q86Y22 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL23A1Q86Y22 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL23A1Q86Y22 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 POLD2P1-201ENST00000511220 997 ntBASIC23.89■■□□□ 1.41
COL23A1Q86Y22 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 AC064862.7-201ENST00000604520 867 ntBASIC23.89■■□□□ 1.41
COL23A1Q86Y22 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 AL691432.2-201ENST00000607222 2038 ntBASIC23.89■■□□□ 1.41
COL23A1Q86Y22 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL23A1Q86Y22 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 AP003733.1-201ENST00000491725 852 ntBASIC23.88■■□□□ 1.41
COL23A1Q86Y22 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 AL773604.1-201ENST00000617417 272 ntBASIC23.88■■□□□ 1.41
COL23A1Q86Y22 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.88■■□□□ 1.41
COL23A1Q86Y22 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL23A1Q86Y22 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.87■■□□□ 1.41
COL23A1Q86Y22 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms