Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PACS1Q6VY07 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
PACS1Q6VY07 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACS1Q6VY07 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 AL359736.2-201ENST00000621992 437 ntBASIC19.22■□□□□ 0.67
PACS1Q6VY07 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 AC104581.1-202ENST00000635932 2618 ntBASIC19.22■□□□□ 0.67
PACS1Q6VY07 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.22■□□□□ 0.67
PACS1Q6VY07 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS1Q6VY07 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 AC009113.1-201ENST00000570267 2443 ntBASIC19.21■□□□□ 0.67
PACS1Q6VY07 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 AC098590.1-201ENST00000468126 897 ntBASIC19.21■□□□□ 0.67
PACS1Q6VY07 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS1Q6VY07 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PACS1Q6VY07 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 Z98044.1-201ENST00000632503 1764 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms