Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH11P55287 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH11P55287 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH11P55287 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH11P55287 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH11P55287 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH11P55287 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 AC009113.1-201ENST00000570267 2443 ntBASIC17.43■□□□□ 0.38
CDH11P55287 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDH11P55287 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH11P55287 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH11P55287 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH11P55287 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH11P55287 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH11P55287 UBE2SP1-201ENST00000450587 669 ntBASIC17.43■□□□□ 0.38
CDH11P55287 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.43■□□□□ 0.38
CDH11P55287 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH11P55287 RPPH1-201ENST00000516869 333 ntBASIC17.43■□□□□ 0.38
CDH11P55287 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH11P55287 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH11P55287 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH11P55287 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH11P55287 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 ZNF815P-204ENST00000434898 1737 ntBASIC17.43■□□□□ 0.38
CDH11P55287 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH11P55287 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDH11P55287 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH11P55287 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH11P55287 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH11P55287 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH11P55287 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CDH11P55287 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
CDH11P55287 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH11P55287 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDH11P55287 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH11P55287 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CDH11P55287 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH11P55287 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH11P55287 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH11P55287 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 RN7SL471P-201ENST00000580476 299 ntBASIC17.42■□□□□ 0.38
CDH11P55287 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH11P55287 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH11P55287 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH11P55287 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDH11P55287 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDH11P55287 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH11P55287 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH11P55287 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CDH11P55287 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH11P55287 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH11P55287 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH11P55287 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CDH11P55287 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH11P55287 RPS2P4-201ENST00000476944 856 ntBASIC17.41■□□□□ 0.38
CDH11P55287 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.41■□□□□ 0.38
CDH11P55287 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms