Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CPT1AP50416 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CPT1AP50416 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CPT1AP50416 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CPT1AP50416 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CPT1AP50416 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.1■□□□□ 0.97
CPT1AP50416 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
CPT1AP50416 AC011498.5-201ENST00000592027 486 ntBASIC21.1■□□□□ 0.97
CPT1AP50416 AC092119.3-201ENST00000612618 583 ntBASIC21.1■□□□□ 0.97
CPT1AP50416 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPT1AP50416 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.1■□□□□ 0.97
CPT1AP50416 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CPT1AP50416 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.09■□□□□ 0.97
CPT1AP50416 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CPT1AP50416 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.09■□□□□ 0.97
CPT1AP50416 AC026396.1-201ENST00000419388 421 ntBASIC21.09■□□□□ 0.97
CPT1AP50416 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.09■□□□□ 0.97
CPT1AP50416 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
CPT1AP50416 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.09■□□□□ 0.97
CPT1AP50416 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.09■□□□□ 0.97
CPT1AP50416 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.09■□□□□ 0.97
CPT1AP50416 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 AL121672.3-201ENST00000608644 468 ntBASIC21.09■□□□□ 0.97
CPT1AP50416 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.09■□□□□ 0.97
CPT1AP50416 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPT1AP50416 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CPT1AP50416 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.08■□□□□ 0.97
CPT1AP50416 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.08■□□□□ 0.97
CPT1AP50416 BX276092.5-203ENST00000456199 560 ntBASIC21.08■□□□□ 0.97
CPT1AP50416 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.08■□□□□ 0.97
CPT1AP50416 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.08■□□□□ 0.97
CPT1AP50416 SEC1P-202ENST00000473944 940 ntBASIC21.08■□□□□ 0.97
CPT1AP50416 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.08■□□□□ 0.97
CPT1AP50416 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.08■□□□□ 0.97
CPT1AP50416 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPT1AP50416 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPT1AP50416 AC012313.10-201ENST00000623509 926 ntBASIC21.08■□□□□ 0.97
CPT1AP50416 AC112497.1-201ENST00000624824 639 ntBASIC21.08■□□□□ 0.97
CPT1AP50416 LINC01006-201ENST00000333319 2292 ntBASIC21.08■□□□□ 0.96
CPT1AP50416 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPT1AP50416 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.08■□□□□ 0.96
CPT1AP50416 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.08■□□□□ 0.96
CPT1AP50416 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPT1AP50416 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPT1AP50416 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPT1AP50416 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPT1AP50416 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPT1AP50416 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 TSSC2-201ENST00000450217 709 ntBASIC21.07■□□□□ 0.96
CPT1AP50416 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 AC092329.2-201ENST00000598402 547 ntBASIC21.07■□□□□ 0.96
CPT1AP50416 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.07■□□□□ 0.96
CPT1AP50416 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPT1AP50416 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPT1AP50416 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.06■□□□□ 0.96
CPT1AP50416 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.06■□□□□ 0.96
CPT1AP50416 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.06■□□□□ 0.96
CPT1AP50416 MIR3652-201ENST00000579335 131 ntBASIC21.06■□□□□ 0.96
CPT1AP50416 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.06■□□□□ 0.96
CPT1AP50416 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CPT1AP50416 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 286.2 ms