Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SLC6A4P31645 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A4P31645 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A4P31645 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A4P31645 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC6A4P31645 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC6A4P31645 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC6A4P31645 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SLC6A4P31645 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A4P31645 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A4P31645 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SLC6A4P31645 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A4P31645 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A4P31645 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC6A4P31645 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A4P31645 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC6A4P31645 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC6A4P31645 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC6A4P31645 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SLC6A4P31645 KRT8P45-201ENST00000414328 1447 ntBASIC19.54■□□□□ 0.72
SLC6A4P31645 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.54■□□□□ 0.72
SLC6A4P31645 ATP5G1P1-201ENST00000448724 379 ntBASIC19.54■□□□□ 0.72
SLC6A4P31645 AC104076.2-201ENST00000448912 469 ntBASIC19.54■□□□□ 0.72
SLC6A4P31645 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SLC6A4P31645 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC6A4P31645 AC006011.2-201ENST00000621313 1158 ntBASIC19.54■□□□□ 0.72
SLC6A4P31645 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC6A4P31645 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SLC6A4P31645 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A4P31645 FEM1AP3-201ENST00000403722 1741 ntBASIC19.54■□□□□ 0.72
SLC6A4P31645 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.53■□□□□ 0.72
SLC6A4P31645 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 AC005332.7-201ENST00000614046 2005 ntBASIC19.53■□□□□ 0.72
SLC6A4P31645 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 MIR1224-201ENST00000408193 85 ntBASIC19.53■□□□□ 0.72
SLC6A4P31645 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC6A4P31645 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A4P31645 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC6A4P31645 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC6A4P31645 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
SLC6A4P31645 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SLC6A4P31645 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SLC6A4P31645 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC6A4P31645 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A4P31645 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A4P31645 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC6A4P31645 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A4P31645 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A4P31645 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC6A4P31645 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A4P31645 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC6A4P31645 AC010331.1-201ENST00000611423 582 ntBASIC19.52■□□□□ 0.72
SLC6A4P31645 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A4P31645 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A4P31645 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A4P31645 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SLC6A4P31645 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.52■□□□□ 0.71
SLC6A4P31645 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC6A4P31645 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.52■□□□□ 0.71
SLC6A4P31645 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC6A4P31645 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC6A4P31645 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC6A4P31645 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC6A4P31645 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC6A4P31645 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC6A4P31645 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
SLC6A4P31645 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms