Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
KCNA3P22001 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNA3P22001 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNA3P22001 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KCNA3P22001 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNA3P22001 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNA3P22001 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNA3P22001 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNA3P22001 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KCNA3P22001 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNA3P22001 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNA3P22001 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNA3P22001 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.35■■□□□ 1.33
KCNA3P22001 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.35■■□□□ 1.33
KCNA3P22001 IGHV3-41-201ENST00000613121 348 ntBASIC23.35■■□□□ 1.33
KCNA3P22001 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
KCNA3P22001 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNA3P22001 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNA3P22001 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNA3P22001 AL691432.2-201ENST00000607222 2038 ntBASIC23.35■■□□□ 1.33
KCNA3P22001 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNA3P22001 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNA3P22001 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KCNA3P22001 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
KCNA3P22001 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNA3P22001 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNA3P22001 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.34■■□□□ 1.33
KCNA3P22001 MCCD1P1-208ENST00000445732 328 ntBASIC23.34■■□□□ 1.33
KCNA3P22001 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNA3P22001 KRT18P58-201ENST00000527480 1120 ntBASIC23.34■■□□□ 1.33
KCNA3P22001 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.34■■□□□ 1.33
KCNA3P22001 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNA3P22001 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNA3P22001 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNA3P22001 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KCNA3P22001 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNA3P22001 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
KCNA3P22001 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNA3P22001 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
KCNA3P22001 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KCNA3P22001 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.33■■□□□ 1.33
KCNA3P22001 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNA3P22001 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.33■■□□□ 1.33
KCNA3P22001 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNA3P22001 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.33■■□□□ 1.33
KCNA3P22001 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNA3P22001 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.33■■□□□ 1.33
KCNA3P22001 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNA3P22001 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KCNA3P22001 AC092865.5-201ENST00000545435 363 ntBASIC23.33■■□□□ 1.33
KCNA3P22001 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.33■■□□□ 1.33
KCNA3P22001 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.33■■□□□ 1.33
KCNA3P22001 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNA3P22001 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KCNA3P22001 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
KCNA3P22001 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KCNA3P22001 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KCNA3P22001 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
KCNA3P22001 AP005212.1-201ENST00000581547 1997 ntBASIC23.32■■□□□ 1.32
KCNA3P22001 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNA3P22001 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNA3P22001 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNA3P22001 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNA3P22001 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNA3P22001 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNA3P22001 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.32■■□□□ 1.32
KCNA3P22001 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNA3P22001 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
KCNA3P22001 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KCNA3P22001 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNA3P22001 AP005901.3-202ENST00000581653 237 ntBASIC23.32■■□□□ 1.32
KCNA3P22001 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNA3P22001 Z69720.1-201ENST00000601483 472 ntBASIC23.32■■□□□ 1.32
KCNA3P22001 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.32■■□□□ 1.32
KCNA3P22001 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
KCNA3P22001 AL773604.1-201ENST00000617417 272 ntBASIC23.32■■□□□ 1.32
KCNA3P22001 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.32■■□□□ 1.32
KCNA3P22001 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.32■■□□□ 1.32
KCNA3P22001 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.32■■□□□ 1.32
KCNA3P22001 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNA3P22001 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
KCNA3P22001 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
KCNA3P22001 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNA3P22001 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNA3P22001 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNA3P22001 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
KCNA3P22001 CLDN5-201ENST00000403084 2357 ntBASIC23.32■■□□□ 1.32
KCNA3P22001 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNA3P22001 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms