Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 AL845331.1-201ENST00000424978 1190 ntBASIC19.29■□□□□ 0.68
CHRNB1P11230 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
CHRNB1P11230 BX276092.5-203ENST00000456199 560 ntBASIC19.29■□□□□ 0.68
CHRNB1P11230 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNB1P11230 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNB1P11230 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.29■□□□□ 0.68
CHRNB1P11230 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CHRNB1P11230 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNB1P11230 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNB1P11230 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNB1P11230 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CHRNB1P11230 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
CHRNB1P11230 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNB1P11230 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHRNB1P11230 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 AC004870.1-201ENST00000315132 882 ntBASIC19.28■□□□□ 0.68
CHRNB1P11230 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNB1P11230 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNB1P11230 AP002383.4-201ENST00000442518 975 ntBASIC19.28■□□□□ 0.68
CHRNB1P11230 UNC93B7-201ENST00000509439 705 ntBASIC19.28■□□□□ 0.68
CHRNB1P11230 AC111152.3-201ENST00000569699 673 ntBASIC19.28■□□□□ 0.68
CHRNB1P11230 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNB1P11230 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNB1P11230 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNB1P11230 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNB1P11230 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHRNB1P11230 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNB1P11230 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNB1P11230 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNB1P11230 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNB1P11230 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHRNB1P11230 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNB1P11230 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.27■□□□□ 0.68
CHRNB1P11230 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 AC024243.1-201ENST00000609234 778 ntBASIC19.27■□□□□ 0.68
CHRNB1P11230 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNB1P11230 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNB1P11230 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNB1P11230 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNB1P11230 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNB1P11230 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNB1P11230 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNB1P11230 AC104417.2-201ENST00000562989 1793 ntBASIC19.27■□□□□ 0.67
CHRNB1P11230 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNB1P11230 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNB1P11230 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNB1P11230 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNB1P11230 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNB1P11230 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNB1P11230 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNB1P11230 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNB1P11230 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB1P11230 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHRNB1P11230 GPAT2P1-201ENST00000444924 1672 ntBASIC19.26■□□□□ 0.67
CHRNB1P11230 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms