Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
RETP07949 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.21■□□□□ 0.67
RETP07949 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.21■□□□□ 0.67
RETP07949 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.21■□□□□ 0.67
RETP07949 AP003041.3-201ENST00000527151 707 ntBASIC19.21■□□□□ 0.67
RETP07949 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.21■□□□□ 0.67
RETP07949 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RETP07949 AC092119.3-201ENST00000612618 583 ntBASIC19.21■□□□□ 0.67
RETP07949 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RETP07949 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RETP07949 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
RETP07949 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.2■□□□□ 0.66
RETP07949 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.2■□□□□ 0.66
RETP07949 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RETP07949 AC023511.2-201ENST00000618803 211 ntBASIC19.2■□□□□ 0.66
RETP07949 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.2■□□□□ 0.66
RETP07949 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 SMG8-203ENST00000578922 2178 ntBASIC19.2■□□□□ 0.66
RETP07949 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.2■□□□□ 0.66
RETP07949 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RETP07949 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RETP07949 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RETP07949 KRT8P45-201ENST00000414328 1447 ntBASIC19.19■□□□□ 0.66
RETP07949 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RETP07949 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
RETP07949 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.19■□□□□ 0.66
RETP07949 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.19■□□□□ 0.66
RETP07949 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.19■□□□□ 0.66
RETP07949 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.19■□□□□ 0.66
RETP07949 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.19■□□□□ 0.66
RETP07949 NEK4P2-201ENST00000580004 1012 ntBASIC19.19■□□□□ 0.66
RETP07949 AC092329.2-201ENST00000598402 547 ntBASIC19.19■□□□□ 0.66
RETP07949 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RETP07949 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.19■□□□□ 0.66
RETP07949 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RETP07949 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RETP07949 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RETP07949 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RETP07949 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RETP07949 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.19■□□□□ 0.66
RETP07949 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RETP07949 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.18■□□□□ 0.66
RETP07949 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.18■□□□□ 0.66
RETP07949 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.18■□□□□ 0.66
RETP07949 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.18■□□□□ 0.66
RETP07949 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.18■□□□□ 0.66
RETP07949 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RETP07949 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.18■□□□□ 0.66
RETP07949 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.18■□□□□ 0.66
RETP07949 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.18■□□□□ 0.66
RETP07949 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.18■□□□□ 0.66
RETP07949 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.18■□□□□ 0.66
RETP07949 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.18■□□□□ 0.66
RETP07949 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.18■□□□□ 0.66
RETP07949 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.18■□□□□ 0.66
RETP07949 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.18■□□□□ 0.66
RETP07949 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RETP07949 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RETP07949 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RETP07949 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RETP07949 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RETP07949 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RETP07949 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RETP07949 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.17■□□□□ 0.66
RETP07949 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.17■□□□□ 0.66
RETP07949 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms