Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMP1P01033 AC099336.1-202ENST00000602961 463 ntBASIC20.6■□□□□ 0.89
TIMP1P01033 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.6■□□□□ 0.89
TIMP1P01033 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMP1P01033 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMP1P01033 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.6■□□□□ 0.89
TIMP1P01033 AC012676.1-201ENST00000574705 1949 ntBASIC20.6■□□□□ 0.89
TIMP1P01033 LINC00167-201ENST00000530583 1419 ntBASIC20.6■□□□□ 0.89
TIMP1P01033 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TIMP1P01033 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMP1P01033 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.59■□□□□ 0.89
TIMP1P01033 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TIMP1P01033 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TIMP1P01033 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.59■□□□□ 0.89
TIMP1P01033 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TIMP1P01033 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.59■□□□□ 0.89
TIMP1P01033 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.59■□□□□ 0.89
TIMP1P01033 TSPY12P-201ENST00000421279 868 ntBASIC20.59■□□□□ 0.89
TIMP1P01033 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TIMP1P01033 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.59■□□□□ 0.89
TIMP1P01033 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.59■□□□□ 0.89
TIMP1P01033 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.59■□□□□ 0.89
TIMP1P01033 Z69720.1-201ENST00000601483 472 ntBASIC20.59■□□□□ 0.89
TIMP1P01033 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 AC133561.1-201ENST00000568600 2415 ntBASIC20.59■□□□□ 0.89
TIMP1P01033 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.59■□□□□ 0.89
TIMP1P01033 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.59■□□□□ 0.89
TIMP1P01033 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMP1P01033 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TIMP1P01033 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TIMP1P01033 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TIMP1P01033 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TIMP1P01033 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TIMP1P01033 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TIMP1P01033 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TIMP1P01033 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TIMP1P01033 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.58■□□□□ 0.89
TIMP1P01033 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TIMP1P01033 PMS2P1-201ENST00000431037 1228 ntBASIC20.58■□□□□ 0.89
TIMP1P01033 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.58■□□□□ 0.89
TIMP1P01033 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.58■□□□□ 0.89
TIMP1P01033 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TIMP1P01033 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.58■□□□□ 0.89
TIMP1P01033 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.58■□□□□ 0.89
TIMP1P01033 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TIMP1P01033 AF228730.7-201ENST00000641842 219 ntBASIC20.58■□□□□ 0.89
TIMP1P01033 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TIMP1P01033 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TIMP1P01033 KRT8P3-201ENST00000519669 1449 ntBASIC20.58■□□□□ 0.88
TIMP1P01033 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.58■□□□□ 0.88
TIMP1P01033 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TIMP1P01033 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TIMP1P01033 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 AKR1C7P-201ENST00000305623 895 ntBASIC20.57■□□□□ 0.88
TIMP1P01033 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
TIMP1P01033 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.57■□□□□ 0.88
TIMP1P01033 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TIMP1P01033 AP003733.1-201ENST00000491725 852 ntBASIC20.57■□□□□ 0.88
TIMP1P01033 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TIMP1P01033 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.57■□□□□ 0.88
TIMP1P01033 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TIMP1P01033 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.57■□□□□ 0.88
TIMP1P01033 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 AL390719.2-201ENST00000606993 987 ntBASIC20.57■□□□□ 0.88
TIMP1P01033 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TIMP1P01033 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMP1P01033 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.56■□□□□ 0.88
TIMP1P01033 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms