Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.43■□□□□ 0.86
CSPG5O95196 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSPG5O95196 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSPG5O95196 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CSPG5O95196 AP001271.2-201ENST00000624018 1556 ntBASIC20.42■□□□□ 0.86
CSPG5O95196 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CSPG5O95196 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
CSPG5O95196 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.42■□□□□ 0.86
CSPG5O95196 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSPG5O95196 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSPG5O95196 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSPG5O95196 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSPG5O95196 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSPG5O95196 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.42■□□□□ 0.86
CSPG5O95196 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CSPG5O95196 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSPG5O95196 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSPG5O95196 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.42■□□□□ 0.86
CSPG5O95196 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.42■□□□□ 0.86
CSPG5O95196 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.41■□□□□ 0.86
CSPG5O95196 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 AP000523.1-201ENST00000398242 1049 ntBASIC20.41■□□□□ 0.86
CSPG5O95196 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.41■□□□□ 0.86
CSPG5O95196 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.41■□□□□ 0.86
CSPG5O95196 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.41■□□□□ 0.86
CSPG5O95196 AC092597.1-201ENST00000487352 616 ntBASIC20.41■□□□□ 0.86
CSPG5O95196 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CSPG5O95196 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CSPG5O95196 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.41■□□□□ 0.86
CSPG5O95196 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.41■□□□□ 0.86
CSPG5O95196 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.41■□□□□ 0.86
CSPG5O95196 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CSPG5O95196 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.41■□□□□ 0.86
CSPG5O95196 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSPG5O95196 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.41■□□□□ 0.86
CSPG5O95196 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CSPG5O95196 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSPG5O95196 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSPG5O95196 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CSPG5O95196 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CSPG5O95196 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.4■□□□□ 0.86
CSPG5O95196 SPDYE13P-201ENST00000445314 798 ntBASIC20.4■□□□□ 0.86
CSPG5O95196 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.4■□□□□ 0.86
CSPG5O95196 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
CSPG5O95196 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CSPG5O95196 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.4■□□□□ 0.86
CSPG5O95196 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSPG5O95196 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.4■□□□□ 0.86
CSPG5O95196 RNF165-205ENST00000588679 2904 ntBASIC20.4■□□□□ 0.86
CSPG5O95196 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
CSPG5O95196 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CSPG5O95196 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSPG5O95196 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CSPG5O95196 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CSPG5O95196 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.39■□□□□ 0.86
CSPG5O95196 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CSPG5O95196 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CSPG5O95196 AL691432.2-201ENST00000607222 2038 ntBASIC20.39■□□□□ 0.86
CSPG5O95196 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSPG5O95196 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CSPG5O95196 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.39■□□□□ 0.85
CSPG5O95196 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.39■□□□□ 0.85
CSPG5O95196 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.39■□□□□ 0.85
CSPG5O95196 STARP1-201ENST00000397973 869 ntBASIC20.39■□□□□ 0.85
CSPG5O95196 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 AL845331.1-201ENST00000424978 1190 ntBASIC20.39■□□□□ 0.85
CSPG5O95196 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.39■□□□□ 0.85
CSPG5O95196 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CSPG5O95196 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CSPG5O95196 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CSPG5O95196 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG5O95196 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CSPG5O95196 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.38■□□□□ 0.85
CSPG5O95196 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CSPG5O95196 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG5O95196 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CSPG5O95196 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.38■□□□□ 0.85
CSPG5O95196 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG5O95196 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CSPG5O95196 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CSPG5O95196 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG5O95196 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms