Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXTL3O43909 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.67■□□□□ 0.9
EXTL3O43909 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.67■□□□□ 0.9
EXTL3O43909 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.67■□□□□ 0.9
EXTL3O43909 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.67■□□□□ 0.9
EXTL3O43909 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.67■□□□□ 0.9
EXTL3O43909 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.67■□□□□ 0.9
EXTL3O43909 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
EXTL3O43909 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.67■□□□□ 0.9
EXTL3O43909 AC133561.5-201ENST00000635547 218 ntBASIC20.67■□□□□ 0.9
EXTL3O43909 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EXTL3O43909 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EXTL3O43909 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXTL3O43909 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EXTL3O43909 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.67■□□□□ 0.9
EXTL3O43909 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXTL3O43909 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXTL3O43909 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 AL049812.1-201ENST00000432563 2267 ntBASIC20.66■□□□□ 0.9
EXTL3O43909 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.66■□□□□ 0.9
EXTL3O43909 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EXTL3O43909 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.66■□□□□ 0.9
EXTL3O43909 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.66■□□□□ 0.9
EXTL3O43909 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.66■□□□□ 0.9
EXTL3O43909 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.66■□□□□ 0.9
EXTL3O43909 CA15P1-201ENST00000481698 905 ntBASIC20.66■□□□□ 0.9
EXTL3O43909 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EXTL3O43909 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.66■□□□□ 0.9
EXTL3O43909 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.66■□□□□ 0.9
EXTL3O43909 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.66■□□□□ 0.9
EXTL3O43909 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.66■□□□□ 0.9
EXTL3O43909 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
EXTL3O43909 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXTL3O43909 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
EXTL3O43909 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.65■□□□□ 0.9
EXTL3O43909 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.65■□□□□ 0.9
EXTL3O43909 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.65■□□□□ 0.9
EXTL3O43909 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 AC087499.1-201ENST00000418141 1075 ntBASIC20.65■□□□□ 0.9
EXTL3O43909 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.65■□□□□ 0.9
EXTL3O43909 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.65■□□□□ 0.9
EXTL3O43909 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.65■□□□□ 0.9
EXTL3O43909 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
EXTL3O43909 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXTL3O43909 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EXTL3O43909 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EXTL3O43909 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EXTL3O43909 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.64■□□□□ 0.9
EXTL3O43909 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 CYP2D8P-201ENST00000433633 1490 ntBASIC20.64■□□□□ 0.89
EXTL3O43909 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.64■□□□□ 0.89
EXTL3O43909 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EXTL3O43909 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EXTL3O43909 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.64■□□□□ 0.89
EXTL3O43909 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EXTL3O43909 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.64■□□□□ 0.89
EXTL3O43909 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
EXTL3O43909 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 C2orf69P3-201ENST00000565542 1120 ntBASIC20.64■□□□□ 0.89
EXTL3O43909 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
EXTL3O43909 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.64■□□□□ 0.89
EXTL3O43909 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.64■□□□□ 0.89
EXTL3O43909 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.64■□□□□ 0.89
EXTL3O43909 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
EXTL3O43909 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.64■□□□□ 0.89
EXTL3O43909 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXTL3O43909 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.63■□□□□ 0.89
EXTL3O43909 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms